FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006207027

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006207027
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences247923
Sequences flagged as poor quality0
Sequence length101
%GC82

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15310361.75425434509908No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGG18520.7470061269023044No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGG13230.5336334265074236No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT6050.24402737946862532No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGATCCACTGTGTAGATC5060.20409562646466847Illumina Single End PCR Primer 1 (96% over 33bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGG4930.19885206293889635No Hit
GGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGNGGGGG4630.1867515317255761No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG4330.17465100051225582No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3940.15892030993493947No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG3410.137542704791407No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)