FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006207046

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006207046
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences506804
Sequences flagged as poor quality0
Sequence length101
%GC61

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG236094.658408378781541No Hit
ATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG32420.6396950300313337No Hit
ACGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10550.20816725992691454No Hit
GAACTCCAGTCACAGCACTTCAGATCGGAAGAGCACACGTCTGAACTCCA7660.15114324275262234Illumina Multiplexing PCR Primer 2.01 (100% over 29bp)
CTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6890.13594999250203235No Hit
TTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5870.1158238687934586No Hit
TAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5280.10418228743261694No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)