FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006207065

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006207065
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences525769
Sequences flagged as poor quality0
Sequence length101
%GC73

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23767545.205213696509304No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAACAGCGAGTGTAGATC59721.1358600450007512Illumina Single End PCR Primer 1 (97% over 34bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGG9250.17593277656156983No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGG8780.16699348953627924No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGG6350.12077547363956415No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)