FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006207077

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006207077
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences209889
Sequences flagged as poor quality0
Sequence length101
%GC67

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6892632.83926265788107No Hit
GNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8260.3935413480458718No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT4220.201058654812782No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG2580.12292211597558711No Hit
GNGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2100.1000528850964081No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)