FastQCFastQC Report
Sun 7 Aug 2022
EGAF00006209265

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006209265
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4071068
Sequences flagged as poor quality0
Sequence length35-75
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC337940.8301015851368733No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG150080.36865019203805977No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT112750.27695435202752694No Hit
NACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC107320.26361632868819684No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC52950.13006415024263904No Hit
NTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG51520.1265515584608265No Hit
AACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC42900.1053777534543761No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)