FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006209270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006209270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47865787
Sequences flagged as poor quality0
Sequence length35-75
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC26849625.609355174709652No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT16419643.43034994911919No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG5590051.1678592059919541No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC5010271.0467330245713917No Hit
AACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC1946970.4067560823767506No Hit
CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT1512130.3159104017238868No Hit
AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT1441150.30108143839774326No Hit
TACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC1274490.26626324978214605No Hit
CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG1161560.24267019781791113No Hit
GACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC1063660.2222171757042248No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN994440.20775590715765313No Hit
ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG820320.17137919407864327No Hit
GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT808580.16892650276490806No Hit
CCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC540510.11292199165136467No Hit
TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG496260.10367739278996917No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)