FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006209277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006209277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98769694
Sequences flagged as poor quality0
Sequence length35-75
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC5411080.5478482093910304No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT3881120.39294644367329923No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC1866080.18893244723427005No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)