FastQCFastQC Report
Sun 7 Aug 2022
EGAF00006209336

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006209336
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6085297
Sequences flagged as poor quality0
Sequence length35-75
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT111450.18314636081032692No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG71580.11762778382057605No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC61970.1018356211701746No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)