FastQCFastQC Report
Sat 6 Aug 2022
EGAF00006209343

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006209343
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences506068
Sequences flagged as poor quality0
Sequence length35-75
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC263015.197127658733609No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT72851.439529865551665No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC51761.0227874514887327No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG36540.7220373546638001No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA8510.16815921970960424No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACNCACACACACAC6880.13595010947145442No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAAAC5420.10710023158943068No Hit
CACACACACACACACACACACNCNNACACACNCACACACANACACACACACNNACNCACACACNCACACACACAC5120.10117217449038468No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)