FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006209356

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006209356
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80549023
Sequences flagged as poor quality0
Sequence length35-75
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC4944630.6138659186468345No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC2841410.3527553648912663No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG2571600.3192589933710307No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT2305530.28622693536580823No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)