FastQCFastQC Report
Sat 6 Aug 2022
EGAF00006209366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006209366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2361686
Sequences flagged as poor quality0
Sequence length35-75
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC251291.0640279867857114No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG229560.9720174485515857No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC213550.9042268955314128No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT161720.6847650365035827No Hit
ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG43870.18575712435946184No Hit
CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG27330.11572241187016394No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)