FastQCFastQC Report
Tue 26 Jul 2022
EGAF00006209611

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006209611
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17048243
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCAT262890.1542035739401415No Hit
GGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCG184140.10801113053116383No Hit
CGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCT170860.1002214715029578No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)