FastQCFastQC Report
Thu 30 Jun 2022
EGAF00006210372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006210372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9409
Sequences flagged as poor quality0
Sequence length168-9263
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG520.5526623445637157No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA300.31884366032522055No Hit
TGTACTTCGTTCAGTTACGTATTGCTACTTGCCTGTCGCTCTATCTTCTT100.10628122010840685No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)