FastQCFastQC Report
Tue 6 Sep 2022
EGAF00006214762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006214762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences301947120
Sequences flagged as poor quality0
Sequence length28
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCACTCTCGACTGCCGGCGACGGCCG31887741.056070347682071No Hit
GCTTCACAATGATAGGAAGAGCCGACAT13826140.4578993831767629No Hit
TGTCCACTCTCGACTGCCGGCGACGGCC5193310.17199402332434896No Hit
GGGCGGGATTCTGACTTAGAGGCGTTCA5090460.16858779775743515No Hit
CTCTCGACTGCCGGCGACGGCCGGGTAT4871900.16134944423381153No Hit
GCCGTATCGTTCCGCCTGGGCGGGATTC3850120.1275097440902897No Hit
CGTCCATTCTCGACTGCCGGCGACGGCC3811180.12622011430345817No Hit
ACTCTCGACTGCCGGCGACGGCCGGGTA3626430.12010149326809277No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)