FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215179

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215179
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34662967
Sequences flagged as poor quality0
Sequence length35-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCA761260.2196176686202309No Hit
AGATCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG712370.205513278768087No Hit
AGATCTGCTGTCTCTTACTTTTAACCAGTGAAATTGACCTGCCCGTGAAGAGGCGGGCATAACACAGCAAGACG675760.19495157468776406No Hit
AGATCTCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACC521280.15038528005984025No Hit
AGATCTGGAACAAGTTACCCTAGGGATAACAGCGCAATCCTATTCTAGAG422540.12189954772192466No Hit
AGATCTGTGAAATTGACCTGCCCGTGAAGAGGCGGGCATAACACAGCAAG406200.11718558310371988No Hit
AGATCTCGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGAAATTGACCTGCCCGTGAAGAGGCGGGCATAACAC374440.10802306680787019No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)