FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215207

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215207
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11934697
Sequences flagged as poor quality0
Sequence length91
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG670055656.14349488721834No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAG10814499.061386309179026No Hit
GGTTTCCCAGTCCACTATACTGACTTGAGAATAAAACGGAAAAAAATGTT3894803.2634259587821965No Hit
GGGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG450540.37750434719876No Hit
GGTGTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG391320.32788431914107247No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG340500.2853025929355391No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG284010.23797001297980167No Hit
GGTTTCCCAGTCCACTATACTTTGCATGTCTCAGAAGAAGAAAAAAGAAA274480.2299848919499171No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCACTTGGCGAG254790.21348677725123646No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCGTGGCGAG157260.13176706538925956No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAG134550.1127385135961139No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)