FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215221

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215221
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences643
Sequences flagged as poor quality0
Sequence length51
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAG32250.07776049766719No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12218.973561430793158No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT6810.57542768273717No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAG111.7107309486780715No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT50.7776049766718507No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTAGAG30.46656298600311047No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAGA30.46656298600311047No Hit
GACTGGGAAACCCTGTCTCTTATACCATCTGACGCTGCCGACGAATAGAGA30.46656298600311047No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGA30.46656298600311047No Hit
GACTGGGAAACCCTGTCTCTTATACACATTGACGCTGCCGACGAATAGAGA20.3110419906687403No Hit
GACTGGCACGCTCCAGGGTTTCCCAGTATAGTGGACTGGGAAACCCTGTCT20.3110419906687403No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCCTGCCGACGAATAGA20.3110419906687403No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAGA20.3110419906687403No Hit
CTGAACCTGGAGGGTTCCGGAGAGGAGAGTGGGAAACTAGACTCTGCAGCT20.3110419906687403No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT20.3110419906687403No Hit
GACTGGGAAATCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAG20.3110419906687403No Hit
GACTGGCACGCTCCGTCAGATGTGTATAGTGGACTGGGAAACCCTGTCTCT20.3110419906687403No Hit
GACTGGCAAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGA20.3110419906687403No Hit
CACTGGTAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAG20.3110419906687403No Hit
GACTGGCACGCTCCGTCTCGTGGGCTCGGAGATGTGTATAGTGGACTGGGA20.3110419906687403No Hit
GACTGGGAAACCCTGTCTCTTATACATCTGACGCTGCCGACGAATAGAGAG10.15552099533437014No Hit
CTTGGCCGGTCATCTGTCTATTATACACAACTTACGCTGCCGACGAAAATA10.15552099533437014No Hit
GACTGGGAAACCCTGTCTCTTATACACAACTGACGCTGCCGACGAATAGAG10.15552099533437014No Hit
GTCCAACCCTGTGATGATTGATGCCACTGCTTCCCATGTATCTGTCTCTTA10.15552099533437014No Hit
GGGTGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.15552099533437014No Hit
GAATGGCACGCACCATGACAGGAACAGAATTCTCTGCCTCGCCAAGCGGCT10.15552099533437014No Hit
GGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGTGGG10.15552099533437014No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGTCGACGAATAGAG10.15552099533437014No Hit
GTTCTGAGCAACGTGATGGGATTTGGGATGCACAGGCACACTCCTGGCTGT10.15552099533437014No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGCCGAATAGA10.15552099533437014No Hit
GGGGGGGGTGGACCCGCACTAAAAAAAAAAAAAAACAACACAACAAAAAAT10.15552099533437014No Hit
GAAGACATTATGCTAATAAGTTAGACAAATATTGCATGATTCCACTTACAT10.15552099533437014No Hit
TACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAG10.15552099533437014No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCAGCT10.15552099533437014No Hit
GACTGGGAAACCCTGTCTCTTTACACATCTGACGCTGCCGACGAATAGAGA10.15552099533437014No Hit
GACTGGCAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAGA10.15552099533437014No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGG10.15552099533437014No Hit
GCCCGATGTGTAGGAAGAGGCAGATAAAGAATATTGAGGCGCCATTGGCGT10.15552099533437014No Hit
CTACAACTCTAATCAGACTCAAAAAAAAAAATTAAAAAAACCACCAAAAAA10.15552099533437014No Hit
GACTGGCAAACCCTGTCTCTTATCCACCTCTGACGCTGCAGACGAATAGAG10.15552099533437014No Hit
CTCCAACCCTCAAAAGTCTCATAAAAACAAATTAAAAAAAACACGAATAGA10.15552099533437014No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTAGAGA10.15552099533437014No Hit
AGGAATTGGACAATTCACAAATTAAAAACATTCCAACAACACTCAAGAATC10.15552099533437014No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACCCTGCCGACGAAAAGA10.15552099533437014No Hit
GACTGGCACGCTCCGTCTCGTGGGCTCGGAGATTTGTATAGTGGACTGGGA10.15552099533437014No Hit
GAGATGTGAGAGAGAGTCAGAGACAGAGACAGAGAGAGAGAGAGAGAGACA10.15552099533437014No Hit
ACTGCATGAGGGTCTGGGAAGCTGAGGGGCTGGAGCCTGTCTCTTATACAC10.15552099533437014No Hit
TTGGTATTTCTGGTGTAAATTACTTGAGCTCTGTGCTTTGAAACCAGTTTG10.15552099533437014No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGAGGCAAGACGTCCGGCCCGCCCAG10.15552099533437014No Hit
ATTAGCCCCAAAACAATCTCAAAAAAAAAACAGAAACATCCGACCAAAAAA10.15552099533437014No Hit
GACTGGCACGCTCCAGTATAGTGGACTGGGAAACCCTGTCTCTTATACACA10.15552099533437014No Hit
GACTGGGAAACCCTGTATCTTATACACATCTGACGCTGCCGACGAATAGAG10.15552099533437014No Hit
CTCCAACCCTCAAAAGTCTCGTAAAAACATATTAAAAAAAACAAGAAAAGA10.15552099533437014No Hit
CACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAG10.15552099533437014No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGCCGAATAGAG10.15552099533437014No Hit
GACAGGGAAAACCAGTCTCTTAAAAACAAAATAAACATCCCACGAATAAAG10.15552099533437014No Hit
CAATGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAT10.15552099533437014No Hit
ACTACAGGAGGCATTCTACAAAGGGAAGTGAATAAAAAGCCTGTCAAGCAG10.15552099533437014No Hit
CTCCAACCCTCAAAAGTCTCATAAAAAAAAATTAAAAAAAAAAACAAAAGA10.15552099533437014No Hit
GACTGGCACTCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.15552099533437014No Hit
GACTGGCACGTTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.15552099533437014No Hit
GACTGGCACGCTCCAGTATAGTGGACTGGGAAACCCTGTCTCTATACACAT10.15552099533437014No Hit
GACTGGCACGGTCTCGTGGGCTCGGAGATGTGTATAGTGGACTGGGAAACC10.15552099533437014No Hit
GACTGGTAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAG10.15552099533437014No Hit
GACATGGAAAACACTAAAATAAAAACAACATAACCAGCCCACCAAAATAAA10.15552099533437014No Hit
CCGTGGAGCCGGAGGTGGCAATTCACCGAATTCGAATCACCCTAACAAGCC10.15552099533437014No Hit
GACTGGGAAACCCTGTCTCTTAAACACATCTGACGCTGCCGACGAATAGAT10.15552099533437014No Hit
GACTGGCACGCTCCGAGTCCACGGTCTCGTGGGCTCGGAGATGTGTATAGT10.15552099533437014No Hit
GACTGGGAAACCCTGTCTCTTATAACATCTGACGCTGCCGACGAATAGAGA10.15552099533437014No Hit
GACTGGCACGCTCGTCTCGTGGGCTCGGAGATGTGTATAGTGGACTGGGAA10.15552099533437014No Hit
CACCAACACTAATCAAAATATAAAAAAAAAATAAAAAAAACTACCAAAAAA10.15552099533437014No Hit
CAGGGCCGGTCATCTTTATCATATACAAATCTGACCCAGCCGACGAATAGA10.15552099533437014No Hit
GCTCTACTGGCCTTTATAATTTGTTTGTGTGTGCTTGCTTTTTGTCTCCAT10.15552099533437014No Hit
CCTGGTCCACCCGGCATGTCAGTCAGCACTCTGGCCTTCATCACGAGAGCT10.15552099533437014No Hit
ATCTGTAAAAGAGTATTGTAGTAATCTCGCTGTATGTGCTTCTTGCTGTTG10.15552099533437014No Hit
GGTGGGTGGGGTTGGGGGGTGGGGGGGGTTTGGTTTGGGGGGGGGGTGGGG10.15552099533437014No Hit
CCACTTTACGGGGTTTCCCCTCTCTGTCAATTTTACAAAGGCCTACCCATT10.15552099533437014No Hit
GACTGGGAAACCCTGTCTCTAATACACATCTGACGCTGCCGACGAATAGAG10.15552099533437014No Hit
GGGGGGGGGGGGTGGTGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGG10.15552099533437014No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTAACGCTGCCGACGAATAGAG10.15552099533437014No Hit
GACTGGGAAACCATGTCTCTTATACACATCTGACGCTGCAGACGAATAGAT10.15552099533437014No Hit
CCTCGATTGGTGCAGCATGATACCAATCGGTGACGTTCCCTGTGCCTGTCT10.15552099533437014No Hit
GACTGGCACGCTCTGTATAAGAGACAGGGTTTCCCAGTATAGTGGACTGGG10.15552099533437014No Hit
TATGATCCTCGGGCACTCTCTTTCCTTTATGTTTATGGTTTCATTTTCTTA10.15552099533437014No Hit
GCTCTGTGGCCAGGCTTTTCAGCCCCTCCCCACTCCCCATCAGCAGTGGCT10.15552099533437014No Hit
CTGGGCCCGTCAAATTTATATTATAAAAAACAGACGCAGCCCACGAAAATA10.15552099533437014No Hit
ACTCACTCCTTCGTTAAAAACGAAATTTCCTCATATAATATTACACAAAAA10.15552099533437014No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCTCCAAGCGGCT10.15552099533437014No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAT10.15552099533437014No Hit
CCTCTCCCTCCTCTCCCTCCTGAGTAGCTAGGACTATAGGCGCATACCACC10.15552099533437014No Hit
GACTGGCAGTATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACG10.15552099533437014No Hit
GACTGGGAAACCCTGTCTTTATACACATCTGACGCTGCCGACGAATAGAGA10.15552099533437014No Hit
TTTATTGAAGAGGGTATCCTTTCCACAATGTATGTTCTTGATGCCTTTATC10.15552099533437014No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT10.15552099533437014No Hit
CCCTCTGAGTGGCCAGTCGAACTGGAACTTGGTAAGCTTGAAAGGGGCAAA10.15552099533437014No Hit
GGGGACTCCGCGGCGCGGTCGGATTGTCCTGTTCTCCGTGCTGCGCCGTTT10.15552099533437014No Hit
GACGCACACGCAACAACACAATCCACGCAGACTCACCAAATCCAAGCAGAT10.15552099533437014No Hit
CCTTGCACTCAACGCTACGTGTCGAACGTGTCAGAATAACGATCTCACAAA10.15552099533437014No Hit
GACTGGTACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.15552099533437014No Hit
AAAGTCTGATCAGCCACATTTTGACAGTGGAGACTCAGAGGCCTAGTTAGG10.15552099533437014No Hit
AACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAG10.15552099533437014No Hit

[FAIL]Adapter Content

Adapter graph