FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1482
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT100567.81376518218623No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGGACTCCTAT22815.384615384615385No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG352.3616734143049936No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACTC80.5398110661268556No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACGGACTCCTATC70.47233468286099867No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACGGACT60.4048582995951417No Hit
GGTTTCCCAGTACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT50.33738191632928477No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACGGACTC50.33738191632928477No Hit
GGTTTCCCGGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT40.2699055330634278No Hit
GGATTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT40.2699055330634278No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACGGACTC40.2699055330634278No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGGAC40.2699055330634278No Hit
GGTTTCCCAGTCCATATACACATCTCCGAGCCCACGAGACGGACTCCTATC30.20242914979757085No Hit
GGTTTCCCAGTCCTGTCTCTTAACACATCTCCGAGCCCACGAGACGGACTC30.20242914979757085No Hit
GGTTTCACAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT30.20242914979757085No Hit
GGTTCCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT30.20242914979757085No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG30.20242914979757085No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACGGACT30.20242914979757085No Hit
GGTATCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT30.20242914979757085No Hit
GGTTTCCCAGCCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT30.20242914979757085No Hit
GGTTTCCCAGTCCTGTCTCTTATACCATCTCCGAGCCCACGAGACGGACTC30.20242914979757085No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACGGACT30.20242914979757085No Hit
GGTTTCCCAGTCCTGTCTCTTATAACATCTCCGAGCCCACGAGACGGACTC30.20242914979757085No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCAACGAGACGGACT20.1349527665317139No Hit
GGTGTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT20.1349527665317139No Hit
GGTTTCCCAGTCCTGTCTCTTATACAATCTCCGAGCCCACGAGACGGACTC20.1349527665317139No Hit
CCGGAACTGGTCGAATGAGGCACCTAAAAATTGTATACCGCAGATTCAGGC20.1349527665317139No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGACCCACGAGACGGACTC20.1349527665317139No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGACCACGAGACGGACT20.1349527665317139No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACGGACTCCTAT20.1349527665317139No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT20.1349527665317139No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCACACGAGACGGACT20.1349527665317139No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT20.1349527665317139No Hit
AGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT20.1349527665317139No Hit
GGTTTCCCAATCCACTATACACATCTCCGAGCCCACGAGACGGACTCCTAT20.1349527665317139No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)