FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215230

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215230
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22727
Sequences flagged as poor quality0
Sequence length51
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCAGA862437.94605535266423No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAGGG793134.896818761825145No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAGGG3971.7468209618515422No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCAGA3831.6852202226426718No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCGGG3371.4828177938135259No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGGGG3051.3420161041932503No Hit
ATGACCGGCCCAGCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGG2591.1396136753641044No Hit
ATGACCGGCCCAGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGA2170.9548114577374929No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCAACGAGACAGGG2140.9416112993355921No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT1820.8008096097153165No Hit
ATGACCGTCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCAGA930.40920491045892554No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG870.38280459365512387No Hit
ATGACCGTCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAGGG790.347604171250055No Hit
ATGACCTTCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCAGA570.2508030096361157No Hit
ATGACCTTCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAGGG510.22440269283231398No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGATACCAGA510.22440269283231398No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCAGAGCCCACGAGACAGGG460.20240242882914594No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCACACGAGACCAGA460.20240242882914594No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAAGA450.19800237602851234No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCCGA410.1804021648259779No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCAGAGCCCACGAGACCAGA390.1716020592247107No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG370.16280195362344346No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGATCCCACGAGACCAGA370.16280195362344346No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACATGG370.16280195362344346No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGATACAGGG350.15400184802217629No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCAGG350.15400184802217629No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCATGAGACAGGG340.14960179522154265No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGAAAGGG290.12760153121837461No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTACGAGCCCACGAGACAGGG280.12320147841774101No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGATAGGG270.1188014256171074No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCACACGAGACAGGG260.1144013728164738No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGATACCAGA250.11000132001584019No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACTAGACCAGA250.11000132001584019No Hit
TTGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCAGA240.10560126721520659No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAAGG230.10120121441457297No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)