FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215239

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215239
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47551
Sequences flagged as poor quality0
Sequence length51
%GC66

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT4313990.72154108220647No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGAGGA2470.5194422830224391No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1610.33858383630207567No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1230.2586696389140081No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1210.25446362852516247No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1200.2523606233307396No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCAGCT990.2081975142478602No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT710.14931336880402094No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT620.1303863220542155No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCAGCT590.12407730647094699No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT590.12407730647094699No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT560.1177682908876785No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCCCTGCCTCGCCAAGCAGCT540.11356228049883284No Hit
GACTGGCACGCTCCATGACCGGCCCAGTAGTCTCTGCCTCGCCAAGCAGCT530.11145927530441No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGTCTCGCCAAGCAGCT520.10935627010998716No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT510.10725326491556435No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCAGCT510.10725326491556435No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTAGCCAAGCAGCT480.10094424933229586No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)