FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7426
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTAAG426557.433342310799894No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAGGG87011.715593859412873No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTAAG2323.1241583625100997No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCAACGAGACAGGG2162.90869916509561No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGG1892.545111769458659No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAAAG680.915701589011581No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAGGG650.8753029894963642No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTAAGGCGAAT630.8483705898195529No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAAGG520.7002423915970912No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG430.5790465930514408No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGATAGGG400.5386479935362241No Hit
ATGACCGTCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTAAG390.5251817936978185No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGAAAGGG310.4174521949905737No Hit
ATGACCTTCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTAAG300.40398599515216804No Hit
ATGACCGGCCCAGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAG240.32318879612173446No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAGAG230.3097225962833288No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG230.3097225962833288No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGATCATC190.25585779692970645No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAGTG170.22892539725289526No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCCCGAGCCCACGAGACTAAGG150.20199299757608402No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCAGAGCCCACGAGACTAAG150.20199299757608402No Hit
ATGACCGTCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAGGG150.20199299757608402No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACAAGACTAAG150.20199299757608402No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGGCAGGG140.18852679773767841No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATATCCGAGCCCACGAGACTAAG140.18852679773767841No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACATGG130.1750605978992728No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCAACGAGACTAAG130.1750605978992728No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTACGAGCCCACGAGACAGGG130.1750605978992728No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGATCCCACGAGACTAAG110.14812819822246162No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTGGG100.13466199838405601No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACTAGACTAAG90.12119579854565042No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAAAG80.10772959870724481No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGATCACA80.10772959870724481No Hit
ATGACCGACCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTAAG80.10772959870724481No Hit
GTGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTAAG80.10772959870724481No Hit
ATGACCGGCCCAGCAGTCTATTATACACATCTCCGAGCCCACGAGACTAAG80.10772959870724481No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTAGG80.10772959870724481No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)