FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215247

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215247
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57951
Sequences flagged as poor quality0
Sequence length51
%GC67

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT3409058.825559524425806No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1576027.195389208124105No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGAGGA22813.9360839329778607No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCCGCCTCGCCAAGCGGCT5961.028455074114338No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4810.8300115614916049No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1430.24676019395696364No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGTCTCGCCAAGCGGCT1150.198443512622733No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1010.17428517195561766No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT910.15702921433624958No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT720.12424289485945023No Hit
GACTGGCACGCTCCATGACCGGCCCAGTAGTCTCTGCCTCGCCAAGCAGCT640.11043812876395576No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT590.1018101499542717No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT580.1000845541923349No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)