FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences651
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG37156.98924731182796No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTCCTGAGCAT10015.360983102918588No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG406.1443932411674345No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG131.9969278033794162No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACTCCTGA71.0752688172043012No Hit
GGGTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG50.7680491551459293No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACTCCTGA40.6144393241167435No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG40.6144393241167435No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATATCCGAGCCCACGAGACTCCTG40.6144393241167435No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCACCGAGCCCACGAGACTCCTG30.4608294930875576No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACTCCTG30.4608294930875576No Hit
GGTTTCCCAGTCCTGTCTCTTATAACATCTCCGAGCCCACGAGACTCCTGA30.4608294930875576No Hit
GGTTTCCCAGTCCGGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG20.30721966205837176No Hit
GTTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG20.30721966205837176No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTCCT20.30721966205837176No Hit
AGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG20.30721966205837176No Hit
GGTTTCCCATTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG20.30721966205837176No Hit
GGTGTCCCAGTCCTGTCTCTTATACACATCTCCTAGCCCACGAGACTCCTG10.15360983102918588No Hit
GCCGTAGTCGGTGTACTCGTAGGTTCAGTACCATTGGTGGCCAATTGATTT10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATAAACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GCGGGTAGGGCGCCGTGACCTGCGACTTCATGAGCGCGCTGGCATCGTGCG10.15360983102918588No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTCCTGACCAA10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCCTG10.15360983102918588No Hit
GGTTTCCCAGTCCTGTATCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACGTCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTGGAGGGGTGGTGACCATCGAAAGGAGCAAGAGCAAGATCACCGTGACA10.15360983102918588No Hit
GGTTTCCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCT10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACTG10.15360983102918588No Hit
GGTTTCACAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCGAGCCCACGAGACTCCAGA10.15360983102918588No Hit
GGGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTCCTGAGCA10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCGTATACACAACTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCACACATCTCCGAGCCCACGAGACTCCTGAGCA10.15360983102918588No Hit
GGTTTCCCAGTCATGTCTCTTATACACATATCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
CTCTGCTGAGGGTCGTATTTATGGCTGCTTTTATTTTAAAGGAATCTTACC10.15360983102918588No Hit
GGTCTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.15360983102918588No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACTCCTGA10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACTCATG10.15360983102918588No Hit
GGTTGCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGAATACTG10.15360983102918588No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCAGA10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGACCCACGAGACTCCTGA10.15360983102918588No Hit
GGTTTCCCAGGCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.15360983102918588No Hit
GGTTTCCCAGTCCATATACACATCTCCGAGCCCACGAGACTCCTGAGCATC10.15360983102918588No Hit
AATACAAGAGCAGAGCTTTCATGAGATTCTCAACCAAAACCTTCTGTCAGA10.15360983102918588No Hit
CACTACATGGGGATCATTTGGAAACTTGTTAGAAATGTAGACTCAGGTTCC10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACTCCTG10.15360983102918588No Hit
GCTTTCATCCAGCCACTGCCCAAAGCCATCTTCCTGCCTACTGGATGCTTA10.15360983102918588No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG10.15360983102918588No Hit
GGTTTACAGTCACTATACACATCTCCGAGCCCACGAGACTCCTTAGCATCT10.15360983102918588No Hit
GGTTTCCCAGTCCTTCTCTTATACACATCTCCGAGCCCACGAGACTCCTGA10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCTAGCCCACTAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCATG10.15360983102918588No Hit
GGTTTCCCAGTCCTCTATACACATCTCCGAGCCCACGAGACTCCTGAGCAT10.15360983102918588No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATAATCCTGAGCAT10.15360983102918588No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTGTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTGTCTCTTATACACATCTGT10.15360983102918588No Hit
GGGACATGCCAAGCAGACTCTTATACAAATCAACAAGACAAAAATACACCA10.15360983102918588No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC10.15360983102918588No Hit
GGTTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCGTATACACATCTCCGAGCCCACGAGACACCTG10.15360983102918588No Hit
GGTTTCCCAGCCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
AGTGTAGCGACTTTTTTTCTCCTCTTTCTTCTAGTACATATTGATAGGTAT10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTATTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCAGCTTGTCGAGG10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCGAGCCCACGAGACTCCTGA10.15360983102918588No Hit
GGTTTCCCAGTCCACCATACACATCTCCGAGCCCACGAGACTCCTGAGCAT10.15360983102918588No Hit
GCGGTGCACGCCTCCCTGGACAAGTTCCTGGCTTCTGTGAGCACCGTGCTG10.15360983102918588No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACTCCTGAGCATC10.15360983102918588No Hit
GGTTTCCCAGTCCACTATACACATCACCGAGCCCACGAGACTCCTGAGCAT10.15360983102918588No Hit
GGTTTCCAAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACTCCTGA10.15360983102918588No Hit
GCCCTCTGCCACCTCCAATCCCTGGCCCTAATCCCCATGGTCATCTTGGGG10.15360983102918588No Hit
GGTTTCCCAGTCACTATACACATCTCCGAGCCCACGAGACTCCTGAGCATC10.15360983102918588No Hit
GGTTTCACATTCAAAAATACTGACGTAAACAGAATGATACAATATGATATC10.15360983102918588No Hit
GGTGTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACTCCTGA10.15360983102918588No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCAACGAGACTCCTGAGCAT10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTATTATACACATCTCCGAACCCACGACACTCATG10.15360983102918588No Hit
GGTTTCCCAGTCCGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTGA10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCCTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GTTTCCCAGTCCTGTCTCTTATACACATATCCGAGCCCACGAGACTCCTGA10.15360983102918588No Hit
GGGTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACTCCTG10.15360983102918588No Hit
CCCTGTACGAAAGGACAAGAGAAATAAGGCCTACTTCACAAAGCGCCTTCC10.15360983102918588No Hit
GGTTTCCCAGTCCTGGCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGTCCACTATACACATCTCCGATCCCACGAGACTCCTGAGCAT10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTTG10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTACATCTCCGAGCCCACGAGACTCCTGAGCAT10.15360983102918588No Hit
GGTTTCCCAGTCCTATCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGTACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTCCTGAGCCT10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCACACGAGACTCCTG10.15360983102918588No Hit
GGTTTCGCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.15360983102918588No Hit
GGTTTCCCCGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACTCCTGAGCAT10.15360983102918588No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTAGGCGAGG10.15360983102918588No Hit
GGTTTACCAGTCCACAATACACATCACCGAGCCCACGATACTCCTGAGAAT10.15360983102918588No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTGA10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATATCAGAGCACACGAGACTCCTG10.15360983102918588No Hit
GGTTTCCCAGTCCTGTCTCTAATACACATCTCCGAGCCCACGAGACTCCTG10.15360983102918588No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)