FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1011
Sequences flagged as poor quality0
Sequence length51
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTT58357.66567754698318No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22522.255192878338278No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT525.143422354104846No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT151.483679525222552No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTTA50.4945598417408506No Hit
GACTTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTT50.4945598417408506No Hit
GACTGGGAAACCCTGTCTCTTAACACATCTGACGCTGCCGACGACTCCTTA40.3956478733926805No Hit
GACTGGGAAACCCTGTCTCTTATACAATCTGACGCTGCCGACGACTCCTTA40.3956478733926805No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCTACGACTCCTT40.3956478733926805No Hit
TACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTT30.2967359050445104No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTTACGCTGCCGACGACTCCTT30.2967359050445104No Hit
GACTGGGAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTTA30.2967359050445104No Hit
GACTGGGAAACCCTGTCTCTTTACACATCTGACGCTGCCGACGACTCCTTA30.2967359050445104No Hit
GACTGGGAAACCCTGTCTATTATACACATCTGACGCTGCCGACGACTCCTT30.2967359050445104No Hit
GACTGGGAAACCCTGTCTCTTATAACATCTGACGCTGCCGACGACTCCTTA20.19782393669634024No Hit
GACTGGGAAACACTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTT20.19782393669634024No Hit
GACTGGGAAACCCTGTCTCTTATACAAATCTGACGCTGCCGACGACTCCTT20.19782393669634024No Hit
GACTGGTAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTT20.19782393669634024No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT20.19782393669634024No Hit
GACTGGGAAACCCTGTCTCTTATACACATTTGACGCTGCCGACGACTCCTT20.19782393669634024No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)