FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117405
Sequences flagged as poor quality0
Sequence length51
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG6324153.86567863378902No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG4360637.141518674673144No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG2910.24785997189216816No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC2230.18994080320258933No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC2220.18908905072186022No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGTGAGG2190.18653379327967293No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG2060.17546101103019462No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGCTTGGCGAGG2050.17460925854946552No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC1750.14905668412759251No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTAC1610.1371321493973851No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG1530.1303181295515523No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC1480.12605936714790683No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCTGCTTGGCGAGG1350.11498658489842851No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG1310.11157957497551212No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC1230.10476555512967932No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC1180.1005067927260338No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)