FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3910
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG326583.50383631713555No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCA1654.219948849104859No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACAGGCAGAAAT902.3017902813299234No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG210.5370843989769821No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG190.4859335038363171No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG150.3836317135549872No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC130.33248081841432225No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC120.3069053708439898No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCTGCTTGGCGAGG100.2557544757033248No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC100.2557544757033248No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGTGCTGCTTGGCGAGG90.23017902813299232No Hit
GGTTTCCCAGTCCACTTACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC90.23017902813299232No Hit
GGTATCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG70.17902813299232737No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG70.17902813299232737No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGATTGGCGAGG60.1534526854219949No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG60.1534526854219949No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGA60.1534526854219949No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG60.1534526854219949No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCTGCTTGGCGAGG60.1534526854219949No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG50.1278772378516624No Hit
GGTTTCCCAGTCCACATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC50.1278772378516624No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCTGCTTGGCGAGG50.1278772378516624No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCTGCTTGGCGAGG50.1278772378516624No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGATG50.1278772378516624No Hit
GGTTTCCCAGTCCACTAAACTGACGTCTCCAACATGAGCTGCTTGGCGAGG50.1278772378516624No Hit
GGTTTACCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG40.10230179028132991No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCTGCTTGGCGAGG40.10230179028132991No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC40.10230179028132991No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC40.10230179028132991No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)