FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215294

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215294
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences287
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG11138.67595818815331No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTCCTGAGCAT8228.57142857142857No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG217.317073170731707No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG93.1358885017421603No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG41.3937282229965158No Hit
AGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTCCTGAGCAT31.0452961672473868No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATTCCGAGCCCACGAGACTCCTGA20.6968641114982579No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTGA20.6968641114982579No Hit
GGTTTCCCAGTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC20.6968641114982579No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACTCCTGA10.34843205574912894No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATTCTCCGAGCCCACGAGACTCCT10.34843205574912894No Hit
GATCCTCGATTGGTGCAGCATGATACCAATCGGTGATGCTGTCTCTTATAC10.34843205574912894No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCTGCTTGGCGAGG10.34843205574912894No Hit
GGTTTCCCAGTCCTGTCTCTTAACACATCTCCGAGCCCACGAGACTCCTGA10.34843205574912894No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACTCCTGAGCATCT10.34843205574912894No Hit
GGTTTCCCAGTCCTGTCTCTTATACACTCTCCGAGCCCACGAGACTCCTGA10.34843205574912894No Hit
GGACTACAGGTGCCACCACCACGTCCAGCTAATTTTCGTATTGTTTGTAGA10.34843205574912894No Hit
GGTTTCCCAGTCAACTATACACATCTCCGAGCCCACGAGACTCCTGAGCAT10.34843205574912894No Hit
CGTATAGGGTCTGACGCCTGCCCGGTGCCGGAAGGTTAAAAGGAGATGTGC10.34843205574912894No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTCCT10.34843205574912894No Hit
GGTTTCCCAGTCCACTATACTGAAGTCTCCAACATGAGCCGCTTGGCGAGG10.34843205574912894No Hit
GCTACGCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGC10.34843205574912894No Hit
GTTTCCCAGTCCTGCTCTTATACACATCTCCGAGCCCACGAGACTCCTGAG10.34843205574912894No Hit
GGTTTCCCAGTCCACTAAACACATCTCCGAGCCCACCATACACCTCAGCAT10.34843205574912894No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACTCCTGAGCATC10.34843205574912894No Hit
CTTGTTACCCAGGCTGGAGTGCAATGGCGCAATCTCAGCTCACTGCAACCT10.34843205574912894No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCACACGAGACTCCTGAGCAT10.34843205574912894No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCACCGAGCCCACGAGACTCCTG10.34843205574912894No Hit
GCATTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTCCTGAGCAT10.34843205574912894No Hit
GGGACGAAGGGAGGGAGGGAGGAAGAAGGGAAGGAAGGAAGGAAGGAAGGA10.34843205574912894No Hit
GGTTTCCCAGTCCGCTATACACATCTCCGAGCCCACGAGACTCCTGAGCAT10.34843205574912894No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTCAAGAGCAT10.34843205574912894No Hit
GGTTTCCCAGTCCTGTCTCTTATACAATCTCCGAGCCCACGAGACTCCTGA10.34843205574912894No Hit
CCTAGAAGCTGAGACTGGGCCCTCAATAGATGATACCAGTCTGCCAGCACG10.34843205574912894No Hit
CCTTTGACGCTGGGGCTGGCATTGCCCTCAACGACCACTTTGTCAAGCTCA10.34843205574912894No Hit
GTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTGA10.34843205574912894No Hit
GCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATGGCGGCCATGCG10.34843205574912894No Hit
GGTTTCCCAGTCCTGTCTCTTATACAAATCTCCGAGCCCACGAGACTCCTG10.34843205574912894No Hit
GCAAAAAGCCGGTTAGCGGGGGCAGGCCTCCTAGGGAGAGGAGGGTGGATG10.34843205574912894No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTCCT10.34843205574912894No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGACCCACGAGACTCCTGA10.34843205574912894No Hit
GGCTATCAGCAAGGAAAGCTGTGGAGGCTAAACAAAACAAGACAAAACAAG10.34843205574912894No Hit
GGTTTCCCAGTCCACTATACACATCTCCGATCCCACGAGACTCCTGAGCAT10.34843205574912894No Hit
CCCACAATGTGGCCTTGATACTCCTCTCATTAAGAAATGGGGTCTATGTCC10.34843205574912894No Hit
GCAATCCCAGACCTGACTCTTATACACATCTCCGAGCCCACGAGACTCCAG10.34843205574912894No Hit
CCCAGGCATAAGTGTTTTTTCTTAAATTCCTAATGTGTACACTGGAAAGAA10.34843205574912894No Hit
CCTCTTCGTCTGATCCGTCCTAATCACAGCAGTCCTACTTCTCCTGTCGCT10.34843205574912894No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCACACGAGACTCCTG10.34843205574912894No Hit
GGTTTCCCAGTCCACTATACACATCTCAGAGCCCACGAGACTCCTTAGCAT10.34843205574912894No Hit
CTGATTGAGAACAATAGAAAGAGATCATAAAGGGTCATTACTTTCATTTTA10.34843205574912894No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC10.34843205574912894No Hit
GATTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG10.34843205574912894No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGTCCACGAGACTCCTG10.34843205574912894No Hit
CCAGTAAGCTACCCTTTTACCATCATTGGACAAGTAGCATCCGTACTGTAC10.34843205574912894No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATTAGCCGCTTGGCGAGG10.34843205574912894No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATAAACCTG10.34843205574912894No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCAACGAGACTCCTG10.34843205574912894No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCGTGGCGAGG10.34843205574912894No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAACCCACGAGACTCCTGAGCAT10.34843205574912894No Hit
GGTTTCCCAGTCCTGTCTCTTTACACATCTCCGAGCCCACGAGACTCCTGA10.34843205574912894No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)