FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215295

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215295
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences287
Sequences flagged as poor quality0
Sequence length51
%GC68

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATATGCA11740.76655052264808No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9131.70731707317073No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT227.665505226480835No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT113.8327526132404177No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATATGCA41.3937282229965158No Hit
GACTGGGAAACCCTGTCTCTTAACACATCTGACGCTGCCGACGATATGCAG31.0452961672473868No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATATGCAG20.6968641114982579No Hit
GACTGGACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAT20.6968641114982579No Hit
GACTGGGAAACCCTGTCTCTTATCACATCTGACGCTGCCGACGATATGCAG10.34843205574912894No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCATGCGGCT10.34843205574912894No Hit
GGGGGGGGGTGTTGGGGGGTGGGGTGGGGGGGGGGGGGGTGGGGGGTGGTG10.34843205574912894No Hit
CATGAGTCGTACCTGCCCTATAAAGTAACCTTTCTAAAACTTATCTACACT10.34843205574912894No Hit
GGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG10.34843205574912894No Hit
ACTACTATCTCGCACCTGAAACAAGCTAACATGACTAACACACTTAATTCC10.34843205574912894No Hit
GCCGTTAGATCTCCTGAGCTGCATTTCTGTTTAACACGGCCCCCAGTTTGT10.34843205574912894No Hit
GGGGGGGGGGGGGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGTGGTGGG10.34843205574912894No Hit
CTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTC10.34843205574912894No Hit
ACTTTATTGATGGTACATGACAAATTCGTTGTCATACCAGGAAATGAGCTT10.34843205574912894No Hit
TGAACCCGGGAGGCGGAGGTTGCAGTGAGCTGAGATTGCGCCATTGCACTC10.34843205574912894No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTTACGCTGCCTAAGATATGCA10.34843205574912894No Hit
TCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCA10.34843205574912894No Hit
GACTGGGAAACCCTGTCTCTTATACACTCTGACGCTGCCGACGATATGCAG10.34843205574912894No Hit
TACTGGAACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.34843205574912894No Hit
GATACAAAAACCAGGATCATGTGAACTTCTGTAATCTCACTGACTGTCAAA10.34843205574912894No Hit
GAGAAGTAGGACTGCTGTGATTAGGACGGATCAGACGAAGAGGCTGTCTCT10.34843205574912894No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGTCGCTGCCGACGATATGCA10.34843205574912894No Hit
GGTATTAGGATTAGGATTGTTGTGAAGTACAGTACGGATGCTACTTGTCCA10.34843205574912894No Hit
GGGGGGGGTACAAAAAAAAAAAAAAAAAAAAAAACACCACCCCAAAATCAA10.34843205574912894No Hit
GGGGGGGGGGGGGGGGGGGGGGGTGTGGGGGGGGGGGGGGGGGGGGGGGTG10.34843205574912894No Hit
GACTGGGAAATCCTGTCTCTTATACACATCTGACGCTGCCGACGATATGCA10.34843205574912894No Hit
CTGGGCCCGTCATATGTATATAAAAAAAAAAATAACCAGCCGAACAAATTC10.34843205574912894No Hit
ACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAA10.34843205574912894No Hit
CTGGGCCGGTCATCTGTCTCTTATAAACATCTGAAGCTGCCGACGATATGC10.34843205574912894No Hit
GTCTCTACAAACAATACGAAAATTAGCTGGACGTGGTGGTGGCACCTGTAG10.34843205574912894No Hit
GACTGGGAAACCCTGTCTCTTATAACATCTGACGCTGCCGACGATATGCAG10.34843205574912894No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTTACGCTGCCGACGATATGCA10.34843205574912894No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGATATGCAG10.34843205574912894No Hit
CATCACCGATTGGTATCATGCTGCACCAATCGAGGATCCTGTCTCTTATAC10.34843205574912894No Hit
ACGATCAGCGTGCTGGCAGACTGGTATCATCTATTGAGGGCCCAGTCTCAG10.34843205574912894No Hit
CCTTCTTGTTTTGTCTTGTTTTGTTTAGCCTCCACAGCTTTCCTTGCTGAT10.34843205574912894No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGCGCTGCCGACGATATGCAG10.34843205574912894No Hit
GCTTCCATCCATCCATCCTAGCTTCCTAACTTCCTTCCTACCATCCATCCT10.34843205574912894No Hit
AGTACTGGACAACAATTACATGTAAGTTGGGCGAGGACATAGACCCCATTT10.34843205574912894No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)