FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215297

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215297
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26534
Sequences flagged as poor quality0
Sequence length51
%GC66

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT2360988.97640762794904No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATATGCA4571.7223185347101833No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1930.7273686590789176No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCAGCT1020.3844124519484435No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT770.2901937137257858No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT680.256274967965629No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT600.22612497173437854No Hit
GACTGGCACGCTCCATGACCGGCCCAGTAGTCTCTGCCTCGCCAAGCAGCT570.2148187231476596No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCAGCT520.1959749755031281No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT450.16959372880078388No Hit
GACTGGCACGCTCCATGACCGACCCAGCAGTCTCTGCCTCGCCAAGCAGCT370.13944373256953344No Hit
AACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT340.1281374839828145No Hit
GACTGGCACGCTCCATGACCGGTCCAGCAGTCTCTGCCTCGCCAAGCAGCT340.1281374839828145No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT320.12059998492500187No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGTCTCGCCAAGCAGCT280.10552498680937664No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT270.10175623728047034No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)