FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences367
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT11631.607629427792915No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG11531.33514986376022No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG267.084468664850137No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG184.904632152588556No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGAG41.08991825613079No Hit
ATGACCGGACCGGTCATGCCCGTCCGGAACGTCTATAAGAAGGAGAAAGCT41.08991825613079No Hit
ATGACCGGCCCAGCAAAGCAGTGGAATCATCACAGGGTTGGACCTGTCTCT30.8174386920980926No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG30.8174386920980926No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACCAGAG20.544959128065395No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCAGAGCCCACGAGACCAGAG20.544959128065395No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCGAGCCCACGAGACCAGAGA20.544959128065395No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACCAGAGA20.544959128065395No Hit
GTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGATCT20.544959128065395No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG20.544959128065395No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAGA20.544959128065395No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCAGA20.544959128065395No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCATAGAGGAT10.2724795640326975No Hit
GGTTTCCCAGTCCATATACACATCTCCGAGCCCACGAGACCAGAGAGGATC10.2724795640326975No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGACCCACGAGACCAGAGA10.2724795640326975No Hit
GATACAACATATTTTTTTTGTTCTAACATATGAAAATTGGCATAGGATGGT10.2724795640326975No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG10.2724795640326975No Hit
CACTTTAGCCTGTGTACACCTTTGTTGAAGTATGTATCTATGATTTCATCC10.2724795640326975No Hit
GGTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGATC10.2724795640326975No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTATCAGCTTGGCGAGG10.2724795640326975No Hit
GGTTTCCCAGTCCTGTCTCTTATGCACATCTCCGAGCCCACGAGACCAGAG10.2724795640326975No Hit
GAGTACATGGGGAAGCAGTGGCATCAATCATCACAGGGTTGGTCCTGTCTC10.2724795640326975No Hit
GGTTTCCCAGTCCACTATACACATCACCGAGCCCACGAGACCAGAGAGGAT10.2724795640326975No Hit
GCTAATCAGAGTATCACAATCCTTTTGACCATTGTGATTGGTTCAGAAATT10.2724795640326975No Hit
GCATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.2724795640326975No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGACCACGAGACCAGAG10.2724795640326975No Hit
GGTTTACCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG10.2724795640326975No Hit
GGTTTCCCAGTCCACTATACACATCTCAGAGCCCACTATACCAGATAGTAT10.2724795640326975No Hit
GGTTTCCCAGTCCACTATACTGCCAGTTCTGTCTCTTATACACATCTCCGA10.2724795640326975No Hit
GCTGCACAGAGGTAGGAAACGATGAGGTGTGGTGTGTAGACAGATGCACAT10.2724795640326975No Hit
ATGACCTGCCCAGCAGTCTCACAGGGTTGGACCTGTCTCTTATACACATCT10.2724795640326975No Hit
GGTTTCCCAGTCCTGTCTCTTATACAATCTCCGAGCCCACGAGACCAGAGA10.2724795640326975No Hit
GTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAGA10.2724795640326975No Hit
GCTTTATCACTGGTTTTGTTAGAAGACATACAAATGGCAAGGAGGTATATG10.2724795640326975No Hit
AGATTCCCAGTCCTGTCTCTTATAAAAATATACGAGCCCACGAGACCACAT10.2724795640326975No Hit
AGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG10.2724795640326975No Hit
GGTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGATCG10.2724795640326975No Hit
CCTACGAATCTGTGTTTTATTAGGCTCTCCAAGTGATATGATACATATTCT10.2724795640326975No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGAAT10.2724795640326975No Hit
GTTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG10.2724795640326975No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAAAGAGGAT10.2724795640326975No Hit
GGATTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT10.2724795640326975No Hit
GGTTTCCCAGTCCTGTCTCTTTACACATCTCCGAGCCCACGAGACCAGAGA10.2724795640326975No Hit
CAGCACTCGGCCCCATATCAAGTGAATTTATTATGAGGCTAGTAAGAGTCA10.2724795640326975No Hit
GACTAGAAAAGCTATTACCTAAAACAATTTCACAGCACCAAATCTCCACCC10.2724795640326975No Hit
GGTTTCCCAGTCCTGTCTCTTAGAGCGTGCCAGTCCTGTCTCTTATACACA10.2724795640326975No Hit
CCTACTACCTGTTTTTGTAAATCAAGTTTTATCAGAACATAATCATGCTCA10.2724795640326975No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAAAG10.2724795640326975No Hit
GCTGTTGAGGTAGTCCCTAGACCTGTTAGATAGCCCTTCACTGGGCTGTCT10.2724795640326975No Hit
ACTGACTAGCTGGGATTACAGGCACACGCCACCATGCCCTGTCTCTTATAC10.2724795640326975No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCCAGG10.2724795640326975No Hit
GAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAG10.2724795640326975No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATTCTCCGAGCCCACGAGACCAGA10.2724795640326975No Hit
GGATACCCAGTCCTGTCTCTTATACACATCTCCTAGCCCACGAGACCAGAG10.2724795640326975No Hit
GGTTTCCCACCACTATACACATCTCCGAGCCCACGAGACCAGAGAGTATCT10.2724795640326975No Hit
GGTATGATAACAACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGGCTGTC10.2724795640326975No Hit
GAGCATTCCAGGCAGAAGTATTAGCAAGTGCCAAGGCCTCAGAAGTGCTAA10.2724795640326975No Hit
GGTTTCCCAGTCCTTTCTCTTATACACATCTCCGAGCCCACAATACCAGAG10.2724795640326975No Hit
GATTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT10.2724795640326975No Hit
GCCAGAACACACCCTAGTTCTGCTCGACACTGAGGGCCTGGGAGATATAGA10.2724795640326975No Hit
GGTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAGA10.2724795640326975No Hit
ATGACCGGCCCGGTCATGCCCGTCCGGAACGTCTATAAGAAGGAGAAAGCT10.2724795640326975No Hit
GTTGCAGTTACCGTTTTTGATGGCTTCCCACTTTGCAATTCCTTGATGTTT10.2724795640326975No Hit
AGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT10.2724795640326975No Hit
GGTTTCCCAGTCCACTATGCTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.2724795640326975No Hit
GGTTTCCCAGTCCTGTCTCCTATACACATCTCCGAGCCCACGAGACCAGAG10.2724795640326975No Hit
GGTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGATCT10.2724795640326975No Hit
CCTTGCTAGCTGGAATCATGATTTCTTGAACTGAATTTCCCGGTCCATCGC10.2724795640326975No Hit
GAGTACATGGGGAAGCAGTGGCATCAATCATCACAGGGTTGGACCTGTCTC10.2724795640326975No Hit
GGTTTCCCAGTCCTTTCTCTTATACACATCTCCGAGCCCACGATACCAGAT10.2724795640326975No Hit
CCTTAAACTAGTCAGACTATCCGCACCAAGCTGGTTTAAGATGCTGGGTAG10.2724795640326975No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCAGAGCCCACGATACCAGAG10.2724795640326975No Hit
GTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGATC10.2724795640326975No Hit
TATATTTTACTGCTCATTTGGTACTTCTGTACTCCCTTGTATTAGGGCTTT10.2724795640326975No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)