FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215305

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215305
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences488
Sequences flagged as poor quality0
Sequence length51
%GC68

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT31764.95901639344262No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5711.68032786885246No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATATGCA397.991803278688526No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT102.0491803278688523No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT30.6147540983606558No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTAGCCAAGCAGCT20.4098360655737705No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCAAAGCAGCT20.4098360655737705No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTTCCGACGATATGCA10.20491803278688525No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTACCTCGCCAAGCAGCT10.20491803278688525No Hit
CCCTCCAGTGGTGTTTGAATGAGTGAGTGCATTTTGATTGTCATATTTCCT10.20491803278688525No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGAAGCTTCCGACGATATGC10.20491803278688525No Hit
GACTGGGAAACCCTGTCTCTTATACCATCTGACGCTGCCGACGATATGCAG10.20491803278688525No Hit
AATGTGGGGACAGCTAATGAGTGCAAGACGTCTTGTGATGTAATTATTATA10.20491803278688525No Hit
GGGGGGGGGGGGGGGGGGGGGGGTGGGCGGGGGGGGGGGGCGGGGGCCGGG10.20491803278688525No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.20491803278688525No Hit
GCCTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.20491803278688525No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCAGACGATATGC10.20491803278688525No Hit
GAGAGTAAAGCTAAATGAACTACACACCAGTATAAGCATCTACAACCATCT10.20491803278688525No Hit
GTCCAACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGTGGGCAGGGA10.20491803278688525No Hit
CCGGTGAGGAGACTGACACCAGAATAAACACCATGAAATTGGCTGAAAAGG10.20491803278688525No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.20491803278688525No Hit
GACTGGGAAACCCTGTCCCTTATACGCATCTGACGCTGCCGACGATATGCA10.20491803278688525No Hit
CCCACTATTAACCTACTGGGAGAACTCTCTGTGCTAGTAACCACGTTCTCC10.20491803278688525No Hit
CCTGAGATTGGGCTTGGGATTCACAGACACTTCTCAGAGGCGTAAGCTGCT10.20491803278688525No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCAGCT10.20491803278688525No Hit
GACTGGAACGCTACATGACCGGCCCAGCATTCTCTGCCTCGCCAATCACCA10.20491803278688525No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGAT10.20491803278688525No Hit
ATAGGCACGTAAAAATAATATAATAAAAAACAAAAACATCCCACGATAATA10.20491803278688525No Hit
GAATGGCAAGCTCCAAGACCGGCCCAGCAGTATCTGCCTCTCCAACCAGCT10.20491803278688525No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACACTGCCGACGATATGCA10.20491803278688525No Hit
CCTCGATTGGTGCAGCATGATACCAATCGGTGACGTTCCCTGTGCCCTGTC10.20491803278688525No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGATATGC10.20491803278688525No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGATATGCAG10.20491803278688525No Hit
AACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.20491803278688525No Hit
ACATGTGATGTAGACATAAACTACATTGCTATCTGGAATGGTAAATTTGTA10.20491803278688525No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCCGCT10.20491803278688525No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTTTGCCTCGCCAAGCAGCT10.20491803278688525No Hit
CCTCGATTGGTGCAGCATGATACCAATCGGTGACGTTCCCTGTGCCTGTCT10.20491803278688525No Hit
GCACAAAAGAGGTCTGGGAACTTCTCTGCTGCAATGAAAGATCTGTCAGGC10.20491803278688525No Hit
GGGCACAGGGAACGTCACCGATTGATATCATGCTTCACCAATCGAGGATCT10.20491803278688525No Hit
ATCCTCGATTGGTGCAGCATGATACCAATCGGTGACGTTCCCTGTGCCCTG10.20491803278688525No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC10.20491803278688525No Hit
AACTGGCACGCTCCATGACCGGCCCAGCAGTCTCAGACTCGCAAAGCAGCA10.20491803278688525No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.20491803278688525No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATATGCA10.20491803278688525No Hit
GGGGGGGGGGTGGGGGGGGTGGGGGGGGGGGGGGTGGGTGGGGGGGGGGGG10.20491803278688525No Hit
CTATTCGGTGGGGCTATTTCCTGGGACCCCTTCGCCGCCGAGACAATCCGT10.20491803278688525No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT10.20491803278688525No Hit
CCTGAGCTCAAGCAATCTACCCGCCTCAGCCTCCCAAAGTGCCTGTCTCTT10.20491803278688525No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGTGG10.20491803278688525No Hit
GGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGCAGGGGGGGCCGGCAGCC10.20491803278688525No Hit
GACTGGCACGCTCCATTACAGTCCCATAATTCTCTGCCTCGCAAAGCAGCA10.20491803278688525No Hit
GACTGGCATGCTCCATGACCGTCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.20491803278688525No Hit
GACTGGCACGCTCCATGACCGGTCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.20491803278688525No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTATCTGCCTCGCCAAGCAGCT10.20491803278688525No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAGATGCA10.20491803278688525No Hit
GACTGGCACGCTCCATGATCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.20491803278688525No Hit
ACTCTAAGCAGGCTAGGCGCGGTGGCTCACGCCCGTAATCCCAGCACTTTG10.20491803278688525No Hit
GCGATGCACACGGTGACCAAACCACGGAGGCAGCTTCTGGCACTCACACCA10.20491803278688525No Hit
AACAGGTAAACACTGTCTCTTATACACATCTGACGCTGACGACGATATGCA10.20491803278688525No Hit
GTCCAACCCTGTGATGACTGCTGGGCCGGTCATCTGTCTCTTATACACATC10.20491803278688525No Hit
AAAAGGCACTATACAAGAACGGCCCAGCAGTCTCTGCCTCTCCAAGCAGCT10.20491803278688525No Hit
TTATCTACTCCCTCAGGTTCCGGTCTCTCATTCCTTATCATTACCAGCAAA10.20491803278688525No Hit
CTGGGCCGGTCAACTGTCTCTTATACACATCTGACGCAGCCGACGAAATTC10.20491803278688525No Hit
AACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.20491803278688525No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)