FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59095
Sequences flagged as poor quality0
Sequence length51
%GC68

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT5400691.38844233860732No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT2030.3435146797529402No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGTGGCT1700.2876723919113292No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1510.25552077163888653No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1470.24875200947626705No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1450.24536762839495727No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGTCTCGCCAAGCGGCT1260.21321600812251462No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT1070.18106438785007192No Hit
GACTGGCACGCTCCATGGCCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT990.1675268635248329No Hit
GACTGGCACGCTCCATGACCGGCCCAGTAGTCTCTGCCTCGCCAAGCGGCT890.15060495811828412No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT880.14891276757762922No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAATCGGCT810.1370674337930451No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT790.13368305271173533No Hit
CACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT790.13368305271173533No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT790.13368305271173533No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT760.1286064810897707No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT750.12691429054911585No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT730.12352990946780608No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC720.1218377189271512No Hit
ACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTC670.11337676622387681No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT660.11168457568322193No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT620.10491581352060242No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)