FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences601
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCA29949.750415973377706No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACAGGCAGAAAT13322.129783693843592No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG477.820299500831947No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG203.3277870216306153No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAGGC50.8319467554076538No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCA50.8319467554076538No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAG40.6655574043261231No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACAGGCAGAAATC40.6655574043261231No Hit
GTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAG40.6655574043261231No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG40.6655574043261231No Hit
GGATTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCA30.49916805324459235No Hit
GGTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAG20.33277870216306155No Hit
GGTTTCCCAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCA20.33277870216306155No Hit
GTGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACT20.33277870216306155No Hit
GGTTTCACAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCA10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATAGACATCTCCGAGCCCACGAGACAGGCA10.16638935108153077No Hit
ACATTATTGTGTAGTAAAGCACACAAAACTGGACTGTAACATAACACAGTA10.16638935108153077No Hit
GGTGCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAGA10.16638935108153077No Hit
GGTTACCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCA10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATTCCGAGCCCACGAGACAGGCAG10.16638935108153077No Hit
GTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAA10.16638935108153077No Hit
AGTAACGTCGGGGCATTCCGGATAGGCCGAGAAAGTGTTGTGGGAAGAAAG10.16638935108153077No Hit
GTTTAACCAAACAATAAAAAAAAAAAAAAAAAAAACCCACCAAAAAACCAA10.16638935108153077No Hit
GGTTTCCCAGTCCTGCTCTTATACACATCTCCGAGCCCACGAGACAGGCAG10.16638935108153077No Hit
GGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAGAAA10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTAACACATCTCCGAGCCCACGAGACAGGCAG10.16638935108153077No Hit
CCTAAGATAGAGGAGACACCTGCTATGTGTAAGGATAAGATGGTTAGGTCT10.16638935108153077No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCGGGTTGGTCCT10.16638935108153077No Hit
AGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCA10.16638935108153077No Hit
GGTTTCCCAGTCCTTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAG10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCAGCCCACGAGACAGGCAG10.16638935108153077No Hit
AAGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAGGC10.16638935108153077No Hit
CCGTGCCATAAGTTTTTGTTTCTTCAGTTTCTTCTGGGATATCTTTTTCTT10.16638935108153077No Hit
GGTTTCCCAGTTCACTATACACATCTCCGAGCCCACGAGACAGGCAGAAAT10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACAGGCA10.16638935108153077No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCA10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACACATCTCCGATCCCACGAGACAGGCAGAAAT10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACAGGCAGAAAT10.16638935108153077No Hit
GGTTTACCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCA10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTATTATACACATCTCCGAGCCCACGAGACAGGCA10.16638935108153077No Hit
GGTCCAGTCCACTATACACATCTCCGAGCCCACGAGACAGGCAGAAATCTC10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCA10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGACCCACGAGACAGGCAG10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGGCA10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACATGCA10.16638935108153077No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCA10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACAAGACAGGCA10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACATGCAGAAATCG10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACAGCCACAAAA10.16638935108153077No Hit
GGTTGTTAGGGGGTCGGAGGAAAAGGTTGGGGAACAGCTAAATAGGCTGTC10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACTGACGTCACCAACATGAGCCGCTTGGCGAGG10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATATACATCTCCGAGCCCACGAGACAGGCA10.16638935108153077No Hit
GGTCATTAGGAGGGCTGAGAGGGCGCCGCCTGATACTGGCATTTTGTAGAT10.16638935108153077No Hit
GCATACCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCA10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACTCATCTGAGGAGCGTGCCAGTCCTGTCTCTT10.16638935108153077No Hit
GAGTACATGGGAAGGGCGGGGGAAGCCACCAGATGGGCAGCACTGCAGATG10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATACCATCTCCGAGCCCACGAGACAGGCAG10.16638935108153077No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCTGTCTCTTATACACATCT10.16638935108153077No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACAGGCATAAATC10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACAGGCA10.16638935108153077No Hit
GGGGGGTTGGGGGGGGGGGGGGGGGGGGAGGGGGAGAGAGGGGGGGGAGGG10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACAGGCAG10.16638935108153077No Hit
GGTATCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACAGGCA10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACAGGCAGAAATCT10.16638935108153077No Hit
GGTTTCCCAGTCCGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAG10.16638935108153077No Hit
GCTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCATCTTGGCGATG10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACTTATACACATCTCCGAGCCCACGAGACAGGC10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACTGAAGACAGGGTTTCCCAGTCCTGTCTCTTA10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACACATCTCCAGCCCACGAGACAGGCAGAAATC10.16638935108153077No Hit
TTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAGA10.16638935108153077No Hit
GCTACTCATGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGG10.16638935108153077No Hit
GGGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCTGCTTGGCGAGG10.16638935108153077No Hit
CCTGGGGACTGGGGTTCATCACACTTGTATGAAGGGCAGAGTCAGAGCTTG10.16638935108153077No Hit
GGTTTCCCAGTCCATATACACATCTCCGAGCCCACGAGACAGGCAGAAATC10.16638935108153077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCACCGAGCCCACGAGACAGGCA10.16638935108153077No Hit
GNTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACAGGCAGAAATCG10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGTGAGG10.16638935108153077No Hit
GGTTTCCCAGTCCACTATACTGGCGTCTCCAACATGAGCTGCTTGGCGAGG10.16638935108153077No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC10.16638935108153077No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)