FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215320

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215320
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences570
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT31054.385964912280706No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGGACTCCTAT14024.561403508771928No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG315.43859649122807No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG122.1052631578947367No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACTC40.7017543859649122No Hit
CCATCCAGAGCGCCTACGACCAGCTCGTCGGCGTGGCCAACACCGACGACG30.5263157894736842No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT20.3508771929824561No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT20.3508771929824561No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCTAGCCCACGAGACGGACT20.3508771929824561No Hit
GGTTTCCCAGTCCTGTATCTTATACACATCTCCGAGCCCACGAGACGGACT20.3508771929824561No Hit
GGTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGGACTCCTATC20.3508771929824561No Hit
GGTTTCCCAGTCCACTATACAATCTCCGAGCCCACGAGACGGACTCCTATC20.3508771929824561No Hit
GGTTTCCCAGTACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT10.17543859649122806No Hit
GGTATCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT10.17543859649122806No Hit
CCTAAACCAGTCCAAAAAACTCAATAATCAAAAATCAGCCCCAACTCCACA10.17543859649122806No Hit
CTCCGCCGGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTA10.17543859649122806No Hit
GGTTTCCCAGTCCTGCTCTTATACACATCTCCGAGCCCACGAGACGGACTC10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATACACCATCTCCGAGCCCACGAGACGGAC10.17543859649122806No Hit
GGGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAC10.17543859649122806No Hit
GGACTCCCCTAAGGGCTGTGGCACTGTCCTGCTCTCCGGTCCTCGCAAGGG10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGGGCCCACGAGACGGACT10.17543859649122806No Hit
ATCCGGCAGTGGGAGGAGTCCTGGCAGCAGGTGAAGCAGGTCTGCGATGCC10.17543859649122806No Hit
TCTTTTAAAAAGAGATTAAACCGAAGGTGATTAAAAGACCTTGAAATCCAT10.17543859649122806No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCACTTGGCGAGG10.17543859649122806No Hit
GGTTTCCCAGTCTACTATACACATCTCCGAGCCCACGAGACGGACTCCTAT10.17543859649122806No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGAACACA10.17543859649122806No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGGAC10.17543859649122806No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACGGACTCCTAT10.17543859649122806No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT10.17543859649122806No Hit
GGTTCCCCAGTCCTGTCTCTTATACAATCTCCGAGCCCACGAGACGGACTC10.17543859649122806No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTGACTCCTAT10.17543859649122806No Hit
CCTCGATTGGTGCAGCATGATACCAATCGGTGACGTTCCCTGTGCCCTGTC10.17543859649122806No Hit
ACTGGTCCAGAGGCATGAACTTCCTGGAGATTGCCTTCAGCACTTCCTGGG10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACC10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTTTATACACATCTCCGAGCCCACGAGACGGACTC10.17543859649122806No Hit
GGTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACGGACTCCTATCT10.17543859649122806No Hit
GATTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT10.17543859649122806No Hit
GGTTTCCCAGTCAACTATACACATCTCCGAGCCCACGAGACGGACTCCTAT10.17543859649122806No Hit
CCTTTTAAGCTATGTGATTTTACAAGTGATACTTCATAAAGAAAATCAGCG10.17543859649122806No Hit
TCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCG10.17543859649122806No Hit
GGTTTATACCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGCAG10.17543859649122806No Hit
GCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACTCCTAT10.17543859649122806No Hit
TATATCCCAGTCCACAATACACATCTCCGAGCCCACGATACGGACTCCTAT10.17543859649122806No Hit
GGTTTCCCAGTCCACTATACTGACGTCACCAACATGAGCTGCTTGGCGAGG10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCAAGCCCACGAGACGGACT10.17543859649122806No Hit
GGTTTACCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.17543859649122806No Hit
GCTTGGTTCTTCTCCAATGTCTCCTTTTGGAGTTGTACCTGATTTTATTTC10.17543859649122806No Hit
TGCTATTAGAAGGAGTATGGATGCGGTTGCTAGCGTGAGGAAATACTTGAT10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGACCACGAGACGGACT10.17543859649122806No Hit
GGTTTCCCAGTCCACTAAACACATCTCCGAGCCCACGAGACGGACTCCTAT10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACT10.17543859649122806No Hit
ATTCTAGCAGCCTTACTTCAGCTTAATAATCTTATCACCTCTCCCCCAATA10.17543859649122806No Hit
GGTTTCACAGTCCACTATACTGACGACTCCAACATGAGCTGCTTGGCGAGG10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTATTATACACATCTCCGAGCCCACGAGACGGACT10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATACATCTCCGAGCCCACGAGACGGACTCC10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATCACATCTCCGAGCCCACGAGACGGACTC10.17543859649122806No Hit
GGTTTCCCAGTACACTATACTTATACACATCTCCGAGCCCACGAGACGGAC10.17543859649122806No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.17543859649122806No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGA10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCGAGCCCACGAGACGGACTC10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCGTATACACATCTCCGAGCCCACGAGACGGACT10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACCGAGACGGAC10.17543859649122806No Hit
TTTTTGGCACTAGGTAAACTGACTAGCATGGTGTGTGACATTATCAATACT10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACGGACT10.17543859649122806No Hit
GGTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACTC10.17543859649122806No Hit
ATGACCTGCACAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGGAC10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACGGACT10.17543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATAACATCTCCGAGCCCACGAGACGGACTC10.17543859649122806No Hit
GGTTTCCCAGTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC10.17543859649122806No Hit
GGTGTCCCAGTCCTGTCTCTTATACACATCTCCGAGCAAAAGAGAAGGAAT10.17543859649122806No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)