FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215324
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56468
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG5090190.1413189771198No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC2700.47814691506694057No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG2370.41970673655875895No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC1920.3400155840476022No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC1910.3382446695473542No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCTCTCTACAT1820.3223064390451229No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG1360.2408443720337182No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC1310.23198979953247856No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG1240.2195933980307431No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGACGAGG1160.20542608202875964No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCTGCTTGGCGAGG980.17354962102429694No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC940.16646596302330524No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG890.15761139052206558No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCTGCTTGGCGAGG880.15584047602181766No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCTGCTTGGCGAGG860.15229864702132181No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG840.14875681802082596No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCTGCTTGGCGAGG820.14521498902033012No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCTGCTTGGCGAGG710.12573492951760287No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGTGAGG710.12573492951760287No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGATG700.12396401501735496No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG700.12396401501735496No Hit
GGTTTCCCGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC700.12396401501735496No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCTAGG700.12396401501735496No Hit
GGTTTCCCAGTCCACATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC660.11688035701636323No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC650.11510944251611534No Hit
GGTTTCCCAGTCCACTATACTAACGTCTCCAACATGAGCTGCTTGGCGAGG640.1133385280158674No Hit
GGTTTCCCAGTCCACTATACTGACGTATCCAACATGAGCTGCTTGGCGAGG620.10979669901537155No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGA620.10979669901537155No Hit
GGTTTACCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG590.10448395551462776No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)