FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215329

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215329
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142
Sequences flagged as poor quality0
Sequence length51
%GC70

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4330.28169014084507No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC2215.492957746478872No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT2215.492957746478872No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT107.042253521126761No Hit
CCTGTACACGGCACAGCTGTACTGCAGGGTTAGGGACAGGATTTACTGCCA21.4084507042253522No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC21.4084507042253522No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGATACTC21.4084507042253522No Hit
CTGGGCCGGTCATCTGTCTCTTATAAACATCAGACGCTGCCGACGATACTC10.7042253521126761No Hit
GGGGGGTGGGGGGGGGGGTTGGGGGGTGGGGGGGTGGGGGGGTGGGGGGGG10.7042253521126761No Hit
GACTGGCACGCTCCATGACCGGCCCAGTAGTCTCTGCCTCGCCAAGCAGCT10.7042253521126761No Hit
GACTGGCACGCTCCATTACCGGCCAAGCAGTCTCTGCCTCGCCAAGCAGCT10.7042253521126761No Hit
GCTTTTAAGCCATCCGTTACACAGAGACCAGCAGGCTCCCTTCTACCTGTG10.7042253521126761No Hit
CTCTCTCAAGTTCAAAGTTCCACAGATTCCTAGGGTAGGGACTCAATGTTT10.7042253521126761No Hit
GACTGGGAAACCCTGTCTCTTAGACACATCTGACGCTGCCGACGATACTCC10.7042253521126761No Hit
GACTGGGAAACCCTGTCTCTTATACAATCTGACGCTGCCGACGATACTCCT10.7042253521126761No Hit
CCATCTAACAGGATGAAGTTCAGTAAAGCAGGGACTGCCCCTGGCTGTCTC10.7042253521126761No Hit
GACTGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCCTT10.7042253521126761No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCATACGCTGCCGACGATACTC10.7042253521126761No Hit
CCAAGGGTGACCAGGCTTCAGCACCTAGTACAGCATGAGTGATTACAGTCT10.7042253521126761No Hit
GACTGGCACGCGGCGACCCGCTCTCGCCGCGGGAGCAGCTCGAGCAGTCCG10.7042253521126761No Hit
GTCCAACCCTGTGATGATTGATGCCACTGCCTGTCTCTTATACACATCTGA10.7042253521126761No Hit
GACTGGGAAACCCTGTCTCCTTATACACATCTGACGCTGCCGACGATACTC10.7042253521126761No Hit
ACAAGCCGCCTGGTCAGCTTTCCTCCAGATTCCTTCACGATGCGGTCAAGC10.7042253521126761No Hit
CTCCAACCCTCATATGTGCAATAATAACATAATAAGATACAGCAGTTACGC10.7042253521126761No Hit
ATGCATTTGTAATAATCTTCTTCATAGTAATACCCATCATAATCGGAGGCT10.7042253521126761No Hit
GCACTTGCACTGCTCCAACTTTGTATTTATCCATCCCTTATTCTTACCTCT10.7042253521126761No Hit
GACTGGCAGTATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACG10.7042253521126761No Hit
GACTGGCACGCTCTATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.7042253521126761No Hit
CTCCAACCCTCATATGTGCACTGAAAACATAATAAGATACAGAAGTTACGC10.7042253521126761No Hit
GACTGGGAAACCCTGTCTCTTATACACAACTGACGCTGCCGACGATACTCC10.7042253521126761No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCTACGATACTCA10.7042253521126761No Hit
GACTTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC10.7042253521126761No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGG10.7042253521126761No Hit
GACTGGCACGGCACAGCTGTACTGCAGGGTTAGGGACAGGATTTACTGCCA10.7042253521126761No Hit
GGTGTTGCTTGTTCAGTATCTCAAGCCCAGAAAGATGAATTAATCCTTGAA10.7042253521126761No Hit
CCTCGATTGGTGCAGCATGGTACCAATCGGTGACGTTCCCTGTGTCTGTCT10.7042253521126761No Hit
CCTCGATTGGTGCAGCATGATACCAATCGGTGACGTTCCCTGTGCCTGTCT10.7042253521126761No Hit
CAAGGCCCCTCAAAAATAACATAAAAACATCTTAAGCTGCCAACAAAACTC10.7042253521126761No Hit
GACTAGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC10.7042253521126761No Hit
GACTGGGAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCCT10.7042253521126761No Hit
AGATTGAGGTGGTGCCTTCTGCCTCTGCCCTGATCATCAAAGCCCTCAAGG10.7042253521126761No Hit
GACATAGTTTGGGAAACAGTATTTGGGAATCTGGTCACCTGCAAAGCCAGC10.7042253521126761No Hit
GTTATAGGTAGGCTTTTGTATCTATAGGTCTGGATTTAGACATACAAATCT10.7042253521126761No Hit
CTTTTATGGGGAGTAGCTTTTTCACTTTTACACAATGGCAGTAGGTCGTTT10.7042253521126761No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGG10.7042253521126761No Hit
GACTGGGAACCCTGTCTCTTATACACCATCTGACGCTGCCGACGATACTCC10.7042253521126761No Hit

[FAIL]Adapter Content

Adapter graph