FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215330

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215330
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences331
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG15346.22356495468278No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGAGGCTGAT8124.47129909365559No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG154.531722054380665No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGCCATCA30.906344410876133No Hit
CCTCATTTGCATGACGTAATTTAATAACTGGAAGGCCCCGCCCCTCTGGTG30.906344410876133No Hit
GGTTTCCCAGTCCAGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG20.6042296072507553No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACCGAGG20.6042296072507553No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAACCCACGAGACCGAGGCTGAT20.6042296072507553No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCGAG20.6042296072507553No Hit
GGTTTCCCAGTCCGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGGC20.6042296072507553No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGATG20.6042296072507553No Hit
ATGACCGGCCCAGCATCAATCATCACGGGGTTGGACCTGTCTCTTATACAC20.6042296072507553No Hit
GGTTTCCCAGTCCTGTCTCATATACACATCTCCGAGCCCACGAGACCGAGG20.6042296072507553No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCACACGAGACCGAGG20.6042296072507553No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG20.6042296072507553No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGAGGCTGATC20.6042296072507553No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACCGAGGC20.6042296072507553No Hit
ATGACCGGCCCAGCATCAATCATCACAGGGTTGGACCTGTCTCTTATACAC20.6042296072507553No Hit
TCGAGGATCGGGTTTGACCGCTCGCCTCAGTACCGACGAAAAAAAAAAACC10.3021148036253776No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACCGAGGCTGAT10.3021148036253776No Hit
ATCCTCGATTGGTGCAGCATGATACCAATCGGTCTGTCTCTTATACACATC10.3021148036253776No Hit
GGTTTCCCAGTCCTGTCTCTTTATACACATCTCCGAGCCCACGAGACCGAG10.3021148036253776No Hit
AACAAAACTAGGCTGTCCCGAACCCCTGGTAATAGAATTGTTTACCTTTAT10.3021148036253776No Hit
TTCTATTTCTGCTATTTACAAGTAGTATTTTTTTTTTCTCTTTTTTCGGAC10.3021148036253776No Hit
GGTTCCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG10.3021148036253776No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGTAATCA10.3021148036253776No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCAGAGCCCACGAGACCGAGG10.3021148036253776No Hit
GTCAATCAAGGAGGGAAGCCACAAGCAGACTGACAACGTTTCTAGCAGGAT10.3021148036253776No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGTCGAGG10.3021148036253776No Hit
GGTGTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG10.3021148036253776No Hit
GTACACCCAGTGGCTCATATTTAACTTCCCCCAGCTTCCCAATTCAAACTG10.3021148036253776No Hit
GTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGGC10.3021148036253776No Hit
GGTTTCCCAGTCCTGTCTCTTATACAATCTCCGAGCCCACGAGACCGAGGC10.3021148036253776No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATTCCGAGCCCACGAGACCGAGGC10.3021148036253776No Hit
AGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG10.3021148036253776No Hit
GGGTTTGGTGTGGCTGTGCGGGGTTCCTGGGGCCTTGCCGAAATGCCTGTC10.3021148036253776No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATATCCGAGCCCACGAGACCGAGG10.3021148036253776No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACCGAGG10.3021148036253776No Hit
GGTTTCCCAGTCCTGACTCTTATACACATCTCCGAGCCCACGAGACCGAGG10.3021148036253776No Hit
GCTGAGTGGTTGTGTGGTCGCGTCTCGGAAACCGGTAGCGCTTGCAGCATG10.3021148036253776No Hit
TCACCGTGGAGGTCAACTTGTAATGGGCGGTGCGACCGCTGGATTTCTCCT10.3021148036253776No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC10.3021148036253776No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGGC10.3021148036253776No Hit
GGTTTCCCAGTCCACTATACACATCTCCGATCCCACGAGACCGAGGCTGAT10.3021148036253776No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAACCCACGAGACCGAGG10.3021148036253776No Hit
GGTTTACCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG10.3021148036253776No Hit
ATGACCGGCCCAGCAGTCTCTTATACACCTGTCTCTTATACACCTGTCTCT10.3021148036253776No Hit
GTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAG10.3021148036253776No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGAGG10.3021148036253776No Hit
GGTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGGCT10.3021148036253776No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCAACGAGACCGAGGCTGAT10.3021148036253776No Hit
GTATAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGCCACC10.3021148036253776No Hit
GGTTTCCCAGTCCACACACCGTTCCTGGATCTCCTCTCCCCAGGCGGAGCG10.3021148036253776No Hit
GGTATCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG10.3021148036253776No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.3021148036253776No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGTCCACGAGACCGAGG10.3021148036253776No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCAACGAGACCGAGG10.3021148036253776No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGT10.3021148036253776No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGCCATCA10.3021148036253776No Hit
GGTTTCCCAGTCCACTATACAATCTCCGAGCCCACGAGACCGAGGCTGATC10.3021148036253776No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACCGAGGCTGAT10.3021148036253776No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCGAG10.3021148036253776No Hit
GTCTCAAGTCAGTGTACAGGTAAGCCCTGGCTGCCTCCACCCACTCCCAGG10.3021148036253776No Hit
GGTTTCCCAGTCCTGTCTCTTAACACATCTCCGAGCCCACGAGACCGAGGC10.3021148036253776No Hit
ATGACCGGCCCAGCAGTCTCTTATAAAAATCTCCGAGCCCACGACACCGAG10.3021148036253776No Hit
GGTTTCCCAGTCCGTCTCTTATACAACATCTCCGAGCCCACGAGACCGAGG10.3021148036253776No Hit
GGTGGTTATGACAACTATGGAGGAGGAAATTATGGAAGTGGAAATTACAAT10.3021148036253776No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAAACCGAGG10.3021148036253776No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)