FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215331

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215331
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences331
Sequences flagged as poor quality0
Sequence length51
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT16549.848942598187314No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8926.888217522658607No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT144.229607250755287No Hit
GGTTGGAGCGGGGAAATGCACCAGAGGGGCGGGGCCTTCCAGTTATTAAAT30.906344410876133No Hit
GTCCAACCCCGTGATGATTGATGCTGGGCCGGTCATCTGTCTCTTATACAC20.6042296072507553No Hit
GTCCAACCCTGTGATGATTGATGCTGGGCCGGTCATCTGTCTCTTATACAC20.6042296072507553No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCT20.6042296072507553No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATGCTT20.6042296072507553No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT20.6042296072507553No Hit
GACTGGGAAACCCTGTCTCTTATACAATCTGACGCTGCCGACGAAGGCTTA10.3021148036253776No Hit
GACTGGGAAACCCTGTCTCTTATACAACATCTGACGCTGCCGACGAAGGCT10.3021148036253776No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.3021148036253776No Hit
CCTGGGAAACCCTGTCTCTTATACACATCTGACGCAGCCGACGAAGGCTTA10.3021148036253776No Hit
GACTCCATGTCCGAAAAAAGAGAAAAAAAAAATACTACTTGTAAATAGCAG10.3021148036253776No Hit
CTCAAACCCTCATATGTCTCTTATACACATATAACTCTAAAAAAGAATGCT10.3021148036253776No Hit
GACTGGGAAACCCTGTCTCTAACACATCTGACGCTGCCGACGAAGGCTTAG10.3021148036253776No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTGGTTTTTTTTTTTCGT10.3021148036253776No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTATGCCTCGCCAAGCGGCT10.3021148036253776No Hit
GCATTTCGGCAAGGCCCCAGGAACCCCGCACAGCCACACCAAACCCCTGTC10.3021148036253776No Hit
CTGGGCCCGTCAACTGTCTCTTAAAAACAACTGAACCATCCCACGAATGCT10.3021148036253776No Hit
GACTGGGGAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.3021148036253776No Hit
GACTGGGAAACACTGTCTCTTATACACATATGACGCTGCCGACGAAGGCTT10.3021148036253776No Hit
GACTGGGAAACCCTGTCTCTTATTCACATCTGACGCTGCCGACGAAGGCTT10.3021148036253776No Hit
CTGGGCCGGTCATCAGTCACTTATACACAAAAGAAGCAGACCAACAATTCT10.3021148036253776No Hit
CTCCAACCCTCATATGGCTCGTATACACCGATAAATCTAAAAAAGAATGCA10.3021148036253776No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTTA10.3021148036253776No Hit
GTGTATAAGAGACAGGTGTATAAGAGACAGGTATATAAGAGACAGGTGTAT10.3021148036253776No Hit
GGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGG10.3021148036253776No Hit
GACTGGGAAACCCTGTCTCTTATACAAATCTGACGCTGCCGACGAAGGCTT10.3021148036253776No Hit
AATATTAATGTGGGTTTAGGTAATTGTTTAGTTTATGATTGCAGATAAACT10.3021148036253776No Hit
GACTGGGAAACCCTGTCTCTACACATCTGACGCTGCCGACGAAGGCTTAGG10.3021148036253776No Hit
ATTCTGTACAAGGTCTTCACTTTGCTGTCATCATTTGTACAAACTCTTCAT10.3021148036253776No Hit
GACTGGCACGCTCCGCCTGGGGAGAGGAGATCCAGGAACGGTGTGTGGACT10.3021148036253776No Hit
CCCATGTTCCTGCTACCACCAAAGTTTCCACTCTTCATTGGACCGTAGTTA10.3021148036253776No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCGT10.3021148036253776No Hit
CCATGGAAACCCAGTCTCTTATACACAACTGACGCAGCCGACCAAGGCGTA10.3021148036253776No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTTA10.3021148036253776No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGG10.3021148036253776No Hit
GACTGGGAAACCCTGTCTCTTATCACATCTGACGCTGCCGACGAAGGCTTA10.3021148036253776No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCCT10.3021148036253776No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTG10.3021148036253776No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGACTCGCCAAGCGGCT10.3021148036253776No Hit
GACTGGTAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.3021148036253776No Hit
TCTTAATTGGTGGCTGCTTTTAGGCCTACTATGGTTGTTAAATTTTTTACT10.3021148036253776No Hit
ACCGATTGGTATCATGCTGCACCAATCGAGGATCTGTCTCTTATACACATC10.3021148036253776No Hit
CCCTTGGAGGATGGGGCCATGCCGTCAGCTCGGCTGAGAAAGCTGGAGGTG10.3021148036253776No Hit
GACTGGGAAACCCTGTCTCTATAACATCTGACGCTGCCGACGAAGGCTTAG10.3021148036253776No Hit
GACTGGTAAACCCTGTCACTTATACACATCTGACGCTGCCGACGAAGGCTT10.3021148036253776No Hit
CCTTCCACTCCTTCTCGTTGGTTTTCTGGACACAGCTCACCTGATCCTGCT10.3021148036253776No Hit
CCCTGGGAGTGGGTGGAGGCAGCCAGGGCTTACCTGTACACTGACTTGAGA10.3021148036253776No Hit
CTCCAACCCTCATATGTCTCTTATACACATATAAATCTAAAAAAGAAAGCT10.3021148036253776No Hit
CCTGGGAAACCCTGTCTCTTATAAACAACTGACGCTGCCGACGAAGGCGTA10.3021148036253776No Hit
GACTGGCACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGATTAG10.3021148036253776No Hit
GACAGGTAAAAACACTCTCTAATACACATAACACTAACCCTACGAATGCTA10.3021148036253776No Hit
TCTTGGTATAAAGGTAAACAATTCTATTACCAGGGGTTCGGGACAGCCTAG10.3021148036253776No Hit
CTCCAACCCTCATATGTCTCTTATACACATATAAATCTAAAAAAGAAAGCA10.3021148036253776No Hit
GCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCCTTGGAC10.3021148036253776No Hit
GGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.3021148036253776No Hit
CTCCAACCCTCATATGAATACTCTACACCTCTGACAATTCAAAAAAAGACT10.3021148036253776No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)