FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215333

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215333
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37824
Sequences flagged as poor quality0
Sequence length51
%GC67

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1967852.02516920473773No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1467538.79811759729272No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT1910.5049703891708968No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1320.3489847715736041No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT730.19299915397631134No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT610.16127326565143824No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT530.14012267343485618No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT480.12690355329949238No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT470.12425972927241963No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)