FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215334

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215334
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences269
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA12947.95539033457249No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT6223.04832713754647No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG155.5762081784386615No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAATC31.1152416356877324No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG31.1152416356877324No Hit
GGTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAG20.7434944237918215No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACGTAGAG20.7434944237918215No Hit
GGTTTGCCAGTCCTGTCCTCTTATACACATCTCCGAGCCCACGAGACGTAG20.7434944237918215No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACGTAGA20.7434944237918215No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTACGAGCCCACGAGACGTAGA20.7434944237918215No Hit
GGTTTCCCAGTACACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT20.7434944237918215No Hit
GTAAAACCAGTCCAATAAACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.37174721189591076No Hit
GGTTTACCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT10.37174721189591076No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACGTAGAG10.37174721189591076No Hit
GGATTCCCAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACGTAGAG10.37174721189591076No Hit
CCTTGCTAGCTGGAATCATGATTTCTTGAACTGCATTTCCCGGTCCATCGC10.37174721189591076No Hit
GNTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT10.37174721189591076No Hit
GGTTTCCCAGTCCATATACACATCTCCGAGCCCACGAGACGTAGAGGAATC10.37174721189591076No Hit
TGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.37174721189591076No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCAGCCCACGAGACGTAGAG10.37174721189591076No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCCCGAGCCCACGAGACGTAGAGG10.37174721189591076No Hit
GTTGTTGGTGGGTGTATGTGTTTTAAACAGGCTCCCTGGTAATTCTAACCT10.37174721189591076No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGTAAT10.37174721189591076No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACGTAGA10.37174721189591076No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCAGAGCCCACGAGACGTATA10.37174721189591076No Hit
GGTTTCCCAGTCCTGTCTCTTATACAATCTCCGAGCCCACGAGACGTAGAG10.37174721189591076No Hit
AGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.37174721189591076No Hit
GGTTTCCCAGTCCACTATACAAATCTCCGAGCCCACGAGACGTAGAGGAAT10.37174721189591076No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGATTTGCGAGG10.37174721189591076No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT10.37174721189591076No Hit
GCAAACAGCAACCCCTTTCTTCCCTCTTCTTCTCCCCACAGGCATAGGGGC10.37174721189591076No Hit
GGTATCCCAGTCCTGTCTCTTATACACATCTACGAGCCCACGAGACGTAGA10.37174721189591076No Hit
GGTGTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT10.37174721189591076No Hit
CAGTATCACCTAGCCATGTCAAATGAAACTACTGTAAGATGTGCAGCTACT10.37174721189591076No Hit
GGTTACCCAGTCCTGTCTCTTATACACATCTCCGAGTCCACGAGACGTAGA10.37174721189591076No Hit
GGTTTCCCAGTACTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.37174721189591076No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCACACGAGACGTAGA10.37174721189591076No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTTAGAGGAAT10.37174721189591076No Hit
GGTTTCCCAGTCCACTATACACATCACCGAGCCCACGAGACGTAGAGGAAT10.37174721189591076No Hit
GGTTTCCCAGTCCTATCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.37174721189591076No Hit
GGTTTCCCAGTCCTTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAG10.37174721189591076No Hit
CTTCAGACAGAAGGGAAATGATATCTCAGGGAAACTTGCAACAGCAGGAAT10.37174721189591076No Hit
TAAAAAATGCAGGAAAGAAGAATAATCTCAGCGTAAAAAGAAAAAAAGCCC10.37174721189591076No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCAAGCCCACGAGACGTAGA10.37174721189591076No Hit
GGTTTCCCAGTCCTGTCTGTTATACACATCTCCGAGCCCACGAGACGTAGA10.37174721189591076No Hit
GGTTTCCCAGTCCTGTCTCCTATACACATCTCCGAGCCCACGAGACGTAGA10.37174721189591076No Hit
ACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACGGCAC10.37174721189591076No Hit
GGTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAG10.37174721189591076No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.37174721189591076No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACGTAGAGGAATCT10.37174721189591076No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACGTAGAGGAAT10.37174721189591076No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGAAGTATA10.37174721189591076No Hit
GGTTTCCAGTCCTGTCACTTATACACATCACCGATCCCACGAGACGTAGAG10.37174721189591076No Hit
GGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAGGAA10.37174721189591076No Hit
CCACATTGGCCACACAGGCTATCTGAACACGGTGACTGTCTCTCCAGATGG10.37174721189591076No Hit
GGTTTCCCAGTCCTGTCTCTTTACACATCTCCGAGCCCACGAGACGTAGAG10.37174721189591076No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)