FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63271
Sequences flagged as poor quality0
Sequence length51
%GC68

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT5837692.26343822604352No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCTTCGCCAAGCGGCT3260.5152439506250889No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1600.2528804665644608No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1340.21178739074773595No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1290.2038848761675965No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1220.19282135575540135No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT1160.1833383382592341No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT980.15488928577073224No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT910.14382576535853708No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT880.13908425661045346No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT830.13118174203031405No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT820.12960123911428617No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT780.12327922745017465No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT740.11695721578606312No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT730.11537671287003524No Hit
GACTGGCACGCTCCATGACCGGTCCAGCAGTCTCTGCCTCGCCAAGCGGCT690.10905470120592371No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCAAAGCGGCT660.1043131924578401No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)