FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215338

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215338
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1102
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG79472.0508166969147No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTAC867.80399274047187No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGTACTAGAT413.720508166969147No Hit
ATGACCGGCCCAGCAGTCTCAAGCAGTGGCATCAATCATCACAGGGTTGGA383.4482758620689653No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCACTTGGCGAGG40.3629764065335753No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG40.3629764065335753No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGCTTGGCGAGG30.27223230490018147No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC30.27223230490018147No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG30.27223230490018147No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAACCGCTTGGCGAGG30.27223230490018147No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC30.27223230490018147No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGATG30.27223230490018147No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACCGTACTAGATCT20.18148820326678766No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACCAATCATCA20.18148820326678766No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG20.18148820326678766No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG20.18148820326678766No Hit
GGTTACCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG20.18148820326678766No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCCGCTTGGCGAGG20.18148820326678766No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG20.18148820326678766No Hit
ATGACCTGCCCAGCAGTCTCAAGCAGTGGCATCAATCATCACAGGGTTGGA20.18148820326678766No Hit
ATGACCGGCCCAGCAGTCTCAAGCAGTGGCATCAATCATCACAGGGTTGGT20.18148820326678766No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG20.18148820326678766No Hit
GGTATCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG20.18148820326678766No Hit
GGTTTCCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG20.18148820326678766No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC20.18148820326678766No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)