FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215342

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215342
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9254
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG813487.89712556732225No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTG1581.70736978603847No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTCCTGAGCAT700.7564296520423601No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC420.45385779122541603No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG380.4106332396801383No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC350.37821482602118006No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG340.3674086881348606No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC250.2701534471579857No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCTGCTTGGCGAGG210.22692889561270801No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC190.20531661984006916No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG170.1837043440674303No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGATG170.1837043440674303No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG160.17289820618111088No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGA160.17289820618111088No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG160.17289820618111088No Hit
GGTTTCCCGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC140.15128593040847202No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG140.15128593040847202No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCTGCTTGGCGAGG140.15128593040847202No Hit
GGTTTCCCAGTCCACTATACTGACGTATCCAACATGAGCTGCTTGGCGAGG130.1404797925221526No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG130.1404797925221526No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCTAGG120.12967365463583316No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC120.12967365463583316No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCTGCTTGGCGAGG120.12967365463583316No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTTCTTGGCGAGG120.12967365463583316No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)