FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215346

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215346
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences291
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGGC13546.391752577319586No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTAGGCATGAT8328.52233676975945No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG82.7491408934707904No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTAGG41.3745704467353952No Hit
GGTTTCCCAGTCCTGTCTCTTATAACATCTCCGAGCCCACGAGACTAGGCA41.3745704467353952No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGGC31.0309278350515463No Hit
GGTTTCCCAGTCCTGTCACTTATACACATCTCCGAGCCCACGAGACTAGGC20.6872852233676976No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCAACGAGACTAGGC20.6872852233676976No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACTAGGCA20.6872852233676976No Hit
AGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGGC20.6872852233676976No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCAGAGCCCAATAGACTAGGC10.3436426116838488No Hit
GGTTTCCCAGTCCTGTCTCTAATACACATCTCCGAGCCCACGAGACTAGGC10.3436426116838488No Hit
GATATTCATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCT10.3436426116838488No Hit
GGTTTCCCAGTCCACTATACAATCTCCGAGCCCACGAGACTAGGCATGATC10.3436426116838488No Hit
CTGGGCCGGTCACCAGTCTCTTATAAACAACTCCGAGCCCACGAGACTAGG10.3436426116838488No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATGTCCGAGCCCACGAGACTAGGC10.3436426116838488No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACTAGGCATGAT10.3436426116838488No Hit
CGTTTCCCAGTCCTGTATCTTATACACATCTCCGAGCCCACGAGACTAGGC10.3436426116838488No Hit
GGTTTCCCAGTCAACTATACACATCTCCGAGCCCACGAGACTAGGCATGAT10.3436426116838488No Hit
GCTAAACAACAACACTATACAGACGAAACAAAAAAAACACCCATGCCAACT10.3436426116838488No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAATATGAGCCGCTTGGCGAGG10.3436426116838488No Hit
GTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGGCA10.3436426116838488No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACTAGGC10.3436426116838488No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGTTGGTC10.3436426116838488No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGGA10.3436426116838488No Hit
GTTACCTAGGCTGGGGTGCAGTGGCACAATCATGGTTCACTGCAGCCTTGA10.3436426116838488No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACAGGG10.3436426116838488No Hit
GGTTTCCCAGTCCACTAAACTGACGTCTCCAACATGAGCCTCTTGGCGAGG10.3436426116838488No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC10.3436426116838488No Hit
GGTTTCCCAGTCCTGGCTCTTATACACATCTCCGAGCCCACGAGACTATGC10.3436426116838488No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTATGCATTAT10.3436426116838488No Hit
CACCCATAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTCAAGCTC10.3436426116838488No Hit
CCTACATGCCCCCAAATTGAAATTGTCAGCTTAGACCTCTCTGTGGTTTAC10.3436426116838488No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGACCACGAGACTAGGC10.3436426116838488No Hit
TCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCG10.3436426116838488No Hit
GGTTTCCCAGTCCTGTCTCTTATAAACATCTCCGAGCCCACGAGACTAGGC10.3436426116838488No Hit
ATGACCGGCCCAGCAGTCTCACAGGGTTGGTCCTGTCTCTTATACACATCT10.3436426116838488No Hit
GGTTTCCCAGTCCACTATACACATCTCCGACCCACGAGACTAGGCATGATC10.3436426116838488No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACTAGACA10.3436426116838488No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.3436426116838488No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAAACTAGGCATGAT10.3436426116838488No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGGCA10.3436426116838488No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACTAGGC10.3436426116838488No Hit
GATCTTTGGGAGGTGATCAGGTCATGATGGTGAAATCCTCATGAATGGGAG10.3436426116838488No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACTAGGCATGAT10.3436426116838488No Hit
GGTTTCCCAGTCCACTATACACATCTCCAAGCCCACGAGACTAGGCATGAT10.3436426116838488No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGC10.3436426116838488No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACTAGGC10.3436426116838488No Hit
GGTGTTGTGGTGGGCACCTGTAATCCCACCTACTCGGGCTGTCTCTTATAC10.3436426116838488No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGATGGAC10.3436426116838488No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCAAGAGACTAGGC10.3436426116838488No Hit
ATGACCGGCCCAGCAGTCTCACAGGGTTGGACCTGTCTCTTATACACATCT10.3436426116838488No Hit
GGTTTCCAAGTCCTCTATACACATCTCCGAGCCCACGAGACTAGGCATGAT10.3436426116838488No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACTAGGCA10.3436426116838488No Hit
TGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTAGGCATGAT10.3436426116838488No Hit
GGTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTAGGCATGATC10.3436426116838488No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)