FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215347

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences291
Sequences flagged as poor quality0
Sequence length51
%GC68

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT14549.828178694158076No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9331.958762886597935No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT93.0927835051546393No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT31.0309278350515463No Hit
GACTGGGAAACTCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT20.6872852233676976No Hit
ATCGACTCAACTAATTTTTATATTTTTAATAAAAACAAAATTTTACCATCT10.3436426116838488No Hit
CTGGGCCCGTCATCTGTCTCTTATACACAACATACGCATCCGACGAAGGCT10.3436426116838488No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTTA10.3436426116838488No Hit
AGTTAGATGAGAGGGTAAAGCTCAGAGAGGTCTAAGCTGACAATTTCAATT10.3436426116838488No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.3436426116838488No Hit
CTCCAACCCTCAAAAGTATCATAAAAAAAAATTAAAAAAAACAACAAAGCA10.3436426116838488No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTACCGACGAAGGCTT10.3436426116838488No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGATT10.3436426116838488No Hit
GGAGTTCAAGGCTGCAGTGAACCATGATTGTGCCACTGCACCCCAGCCTAG10.3436426116838488No Hit
GACTGGGAAACCCTGTCTCTATACACATCTGACGCTGCCGACGAAGGCTTA10.3436426116838488No Hit
GACTGGGAAACCCTGTCTCTTATACCATCTGACGCTGCCGACGAAGGCTTA10.3436426116838488No Hit
GGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCA10.3436426116838488No Hit
CACTTACACGCTACATGAAATGCACACAATAAACTTCCACGACAACAAGCT10.3436426116838488No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCT10.3436426116838488No Hit
CACCAACTCTAATCATACACTAAAACAAAAAAAAACAACACCACCAAACCG10.3436426116838488No Hit
GTCCAACCCTGTGAGACTGCTGGGCCGGTCATCTGTCTCTTATACACATCT10.3436426116838488No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATGCTT10.3436426116838488No Hit
GACTGGGAAACCCTGTCTCTTATACACACTGACGCTGCCGACGAAGGCTTA10.3436426116838488No Hit
CTGGGCCGGTCATCTGTCTCTTATACACAACTGACGCTGCCGACGAAGGCT10.3436426116838488No Hit
GCTTATGCGGAGGAGAATGTTTTCATGTTACTTATACTAACATTAGTTCTT10.3436426116838488No Hit
GACTGGGAAACCCTGTCTCTTATAACATCTGACTCTGCCGACGAAGGCTTA10.3436426116838488No Hit
GACTGGGAAACGCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.3436426116838488No Hit
GGGGGGGGGTGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGG10.3436426116838488No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGAAGAAGGCTT10.3436426116838488No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.3436426116838488No Hit
GACTGGCACGCTCCAAGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.3436426116838488No Hit
GACTGGGAAACCCTGTCTTTATACACATCTGACGCTGCCGACGAAGGCTTA10.3436426116838488No Hit
GTGACCGGCCCAGCAGTCTCTTATACACATCTGACGCTGCCGACGAAGGCT10.3436426116838488No Hit
TACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.3436426116838488No Hit
CCGCAGATCTGGTCTAGTGAAGGGCCTATTACAAGTTCATAGACAACCATC10.3436426116838488No Hit
TAAATCTAAACCCAGTCTCTTATACACATCTGACTCTGCAGACTAAGGCTT10.3436426116838488No Hit
CACCAACTCTAATCATACTATAATAAAAAAAAAAAAAAAACGACCAACGCT10.3436426116838488No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCAGACGCAGCCGACGAAGGCG10.3436426116838488No Hit
TATCTCTCCATAAAACTTACAAAATAAAAATAAAATTAAAATACAACTTAA10.3436426116838488No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCTACGAAGGCTT10.3436426116838488No Hit
GACCAACCCTGTGAGACTGCTGGGCCGGTCATCTGTCTCTTATACACATCT10.3436426116838488No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGAGCTGCCGACGAAGGCTTAG10.3436426116838488No Hit
CCCGAGTAGGTGGGATTACAGGTGCCCACCACAACACCCTGTCTCTTATAC10.3436426116838488No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGCTT10.3436426116838488No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)