FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215348

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215348
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences773
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC45358.60284605433377No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCTCTCTACAT17622.76843467011643No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG91.1642949547218628No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC70.9055627425614489No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACCTCTC50.646830530401035No Hit
GGTTTCCCAGTCCTGTCTCTTATAACATCTCCGAGCCCACGAGACCTCTCT50.646830530401035No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCT50.646830530401035No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCTCT40.517464424320828No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACCTCTCTACATC40.517464424320828No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG40.517464424320828No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCTCTATACAT30.38809831824062097No Hit
GTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCT30.38809831824062097No Hit
GGTTTCCCAGTCCTTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCT30.38809831824062097No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTA20.258732212160414No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTACGAGCCCACGAGACCTCTC20.258732212160414No Hit
GGTTTCCCAGTACTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC20.258732212160414No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACCTCTCTACAT20.258732212160414No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACCTCTCTACATCT20.258732212160414No Hit
GGTTTCCCAGTCCTGTATCTTATACACATCTCCGAGCCCACGAGACCTCTC20.258732212160414No Hit
GGTTTCCCAGTCCTGTCTATTATACACATCTCCGAGCCCACGAGACCTCTC20.258732212160414No Hit
ATTAAATAACTCCCTTTAGCATTTCTTGTAGGGGAGGTCTGGTGTTGATGA20.258732212160414No Hit
GGTTTCCCAGTCCTGTCTCTTATACACACTCCGAGCCCACGAGACCTCTCT20.258732212160414No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGAACTCTCTACAT20.258732212160414No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACCTCTCT20.258732212160414No Hit
ATGACCGGCCCAGCATCAATCATCACAGGGTTGGACCTGTCTCTTATACAC20.258732212160414No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
GGTTTCCCAGTCCAGTCTCTTATACACATCTCCGAGCCCACGAGAACTCTC10.129366106080207No Hit
GCGGCGACCCCGGAGTGCTCGGGCTGGAGCCCGGAGAGCCCTGCTTGAAAC10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCATATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACCACTC10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCACACGAGACCTCTC10.129366106080207No Hit
GCTAGGAAAGTACCTCTTTCCCGTGACACTGGTGATGCAGTGCTAACCAGG10.129366106080207No Hit
GGTTTCCCATTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
CCCTACATGAGGCCATATTTATACGTGCACTGAGCCTAGAAGGATAAACAA10.129366106080207No Hit
GGTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCT10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACCTCTCT10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACCTCTC10.129366106080207No Hit
CCAGTGCTGCCAAGGGGTGATGTGGTTGTCCTCAATTTTTTTCATCTGTGA10.129366106080207No Hit
GGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCTACA10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCAACGAGACCTCTC10.129366106080207No Hit
GGAGTGCAGTGGGGTCATGACTCACTGCAGCCTCAACCTTCTGGCCTCAAG10.129366106080207No Hit
GGTTTCCCAGTCCACTATACAAATCTCCGAGCCCACGAGACCTCTCTACAT10.129366106080207No Hit
GGTTTCCCAGTCCGGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
CCTAGAAGCTTCCTCTAGACATGCTTTAGTTTGTTAATATTCTTTAAATTT10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACATCTC10.129366106080207No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
GGTTTCCCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTTTATACACATCTCCGAGCCCACGAGACCTCTCT10.129366106080207No Hit
ACAAACTCCAGGATCTTTTGAATCTCCCTTTTGGGGTTCTGAGCAGCAGAG10.129366106080207No Hit
GGTTTACCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCAAGCCCACGAGACCTCTC10.129366106080207No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCCGCTTGGCGAGG10.129366106080207No Hit
GTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCTCTCTACATC10.129366106080207No Hit
GGTTTCCCAATCCACTATACACATCTCCGAGCCCACGAGACCTCTCTACAT10.129366106080207No Hit
GGTTTCCCAGGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
TCTCTGTTTTATTTGGGTTTTTTAGTAGGGTGGTGGTGGTGTTGGAAATAA10.129366106080207No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCTCTCAAAAT10.129366106080207No Hit
GGTTTCACAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
AGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCTCTCTACAT10.129366106080207No Hit
TGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
TCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCTACATCGCGT10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTAACACATCTCCGAGCCCACGAGACCTCTCT10.129366106080207No Hit
GGTTTCCCAGTCCAGTCTCTTATACACATCTCCGATCCAACGAGACCTCTC10.129366106080207No Hit
GGTTTCCCAGTCCACATCTCCGAGCCCACGAGACCTCTCTACATCGCGTAT10.129366106080207No Hit
GGTTTCCCAGTCCACTATACACATCTCCCAGTCCTGTCTCTTATACACATC10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGACCACGAGACCTCTC10.129366106080207No Hit
ATGACCGGCCCAGCATCAATCATCACAGGGTTGGTCCTGTCTCTTATACAC10.129366106080207No Hit
ATGACCGGCCCAGCAGTCATCACAGGGTTGGTCCTGTCTCTTATACACATC10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCCGAGACCTCTCT10.129366106080207No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACCTCTCTACATCG10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTAATACACATCACCGAGCCCACGAGACCTCTC10.129366106080207No Hit
GGGTTCCCAGTCCTGTCTCTTAACACATCTCCGAGCCCACGAGACCTCTCT10.129366106080207No Hit
CAGTTGTAGGTGGGTGTTGTGAGAGTGGGGCAGGAGTAGTTACGTGTCTGT10.129366106080207No Hit
AGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCGAGCCCACGAGACCTCTCT10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACAACACCGAGCCCACGAGACCTCTC10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACAAATCTCCGAGCCCACGAGACCTATC10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCCTATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACCTCTCTACAT10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGACCACGATACCTCTC10.129366106080207No Hit
GGTTTCCCAGTCCACTATACACATCTCGAGCCCACGAGACCTCTCTACATC10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACCACTC10.129366106080207No Hit
TAAGGAAAGCGGGAGATAGGACAAAAAAAAGTTCCAATTTGGGAATGCACC10.129366106080207No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGATCATC10.129366106080207No Hit
GGTTTCCCAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCTTATACATCTCCGAGCCCACGAGACCTCTCTA10.129366106080207No Hit
CGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCTCTATACAT10.129366106080207No Hit
GGCACAAGGAACGTCACCGATTGGTATCATGCTGCACCAATCGAGGATCGG10.129366106080207No Hit
ATGACCGGCCCAGCAGTCTCACAGGGTTGGACCTGTCTCTTATACACATCT10.129366106080207No Hit
GTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCCTGTCTCTTATACA10.129366106080207No Hit
GGTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCT10.129366106080207No Hit
GGTTTCCCAGTCCTGTCTCGTATACACATCACCGAGACCACGAGACCTCTC10.129366106080207No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)