FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215350

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215350
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences404
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG20550.742574257425744No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT11127.475247524752476No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG112.722772277227723No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGATC81.9801980198019802No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG71.7326732673267329No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACCAGAGA30.7425742574257426No Hit
GTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAGA30.7425742574257426No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACCAGAGAGGATCT20.49504950495049505No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG20.49504950495049505No Hit
GGTTTCCCAGTCCTGTCTCTTAACACATCTCCGAGCCCACGAGACCAGAGA20.49504950495049505No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAT20.49504950495049505No Hit
GGTTTCCCAGTCCTTCTCTTATACACATCTCCGAGCCCACGAGACCAGAGA20.49504950495049505No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGATCATC20.49504950495049505No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG20.49504950495049505No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATTCCGAGCCCACGAGACCAGAGA20.49504950495049505No Hit
GAGCGTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGA10.24752475247524752No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCAAGAGACCAGAG10.24752475247524752No Hit
GGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAGAGGA10.24752475247524752No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCACACGAGACCAGAGAGGAT10.24752475247524752No Hit
GGTTTCCCAGTCCTGTCTCTTATACATATCTCCGAGCCCACGAGACCAGAG10.24752475247524752No Hit
GGTTTCCCAGTCCTGTCTCTTATCACATCTCCGAGCCCACGAGACCAGAGA10.24752475247524752No Hit
GGTTTCCCAGTCCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGA10.24752475247524752No Hit
GATTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG10.24752475247524752No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCATAG10.24752475247524752No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGAGAGAGGAT10.24752475247524752No Hit
GGTTTCCCAGTCGACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.24752475247524752No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACCAGAG10.24752475247524752No Hit
GGTTTCCCAGTCAACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT10.24752475247524752No Hit
GGTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCCGAGAGGATC10.24752475247524752No Hit
CCTATTTTTAGACAAAAGTTTTTCTCATTTTCACTTTATAAATAATTCTGT10.24752475247524752No Hit
GGTTTCCCAGTCCACTATACTGCCAGTCCTGTCTCTTATACACATCTCCGA10.24752475247524752No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACCAGAG10.24752475247524752No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCAGAGCCCACGAGACCAGAG10.24752475247524752No Hit
TCTAGAGGAGCCTGTTCTGTAATCGATAAACCCCGATCAACCTCACCTGTC10.24752475247524752No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.24752475247524752No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCTGAGCCCACGAGACCAGAG10.24752475247524752No Hit
GGCCAAGTCCCTTCCCTTCTCAGCGGGAGGCCAGCTGGGGCATCCAAAAAG10.24752475247524752No Hit
GAACTCCTGAGCTCAAGTGATCCTCCCACCTTGGCTTCCCAAAGTGCTGGA10.24752475247524752No Hit
GGATTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACCAGAG10.24752475247524752No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTTCGAGCCCACGAGACCAGAG10.24752475247524752No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACAAGACCAGAG10.24752475247524752No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG10.24752475247524752No Hit
GGGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGA10.24752475247524752No Hit
AGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT10.24752475247524752No Hit
GTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGATCG10.24752475247524752No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGAACAGAG10.24752475247524752No Hit
GGTTTCCCAGTCCACTATACACATTCCGAGCCCACGAGACCAGAGAGGATC10.24752475247524752No Hit
GGTTTCCCAGTCCAATATACACATCTCCGAGCCCACGAGACCAGAGAGGAT10.24752475247524752No Hit
GGTTTCCCAGTCCTGTCTCTTATAACATCTCCGAGCCCACGAGACCAGAGA10.24752475247524752No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGATCATA10.24752475247524752No Hit
GGTTTCCCAGTCCTGACTCTTATACACATCTCCGAGCCCACGAGAACATAG10.24752475247524752No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAGA10.24752475247524752No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCAGA10.24752475247524752No Hit
GCCGATACCTTGATCTTGGACTTTCGGCCTCCAGAACTATAAGGAAATACA10.24752475247524752No Hit
GGTTTCCCAGTCCACTATACACATCTCCGATCCCACGAGACCAGAGAGGAA10.24752475247524752No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)