FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215351

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215351
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences404
Sequences flagged as poor quality0
Sequence length51
%GC68

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT20951.73267326732673No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12831.683168316831683No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT92.2277227722772275No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT71.7326732673267329No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTTA30.7425742574257426No Hit
GACTTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT20.49504950495049505No Hit
GACTGGGAAACCCTGTCTCTTATACCATCTGACGCTGCCGACGAAGGCTTA20.49504950495049505No Hit
GACTGGGAAACCCTGTCTCTTATAACATCTGACGCTGCCGACGAAGGCTTA20.49504950495049505No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT20.49504950495049505No Hit
CTCCAACCCTCATATGAAAAATATACCACTCAGAAGATTAAAACAAACTCA10.24752475247524752No Hit
GTGAGGTTGATCGGGGTTTATCGATTACAGAACAGGCTCCTCTAGACTGTC10.24752475247524752No Hit
TGTTGAGAATAACTCAGTACTATATGTTAAAATGCATTAAAAATGCACGTG10.24752475247524752No Hit
CACTGGGAAATCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.24752475247524752No Hit
GACTGGGAAACCCTGTCTCTTATACACGTCTGACGCTGCCGACGAAGGCTT10.24752475247524752No Hit
CTCCAACCCTCATATGAACAATATACAAATCAGAAGATTAAAACAAACTCA10.24752475247524752No Hit
GGATTGGGCGGGTGTGGTGGCTCAAACCTGTAATTCCAGCACTTTGGGAAG10.24752475247524752No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTTGCCGACGAAGGCT10.24752475247524752No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGG10.24752475247524752No Hit
GGGGGGGGGGGGGGGGGGGGGGGGTGCTGAAAACGAGAAGGGGGCGGCGCG10.24752475247524752No Hit
GGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGG10.24752475247524752No Hit
AGCCAATGCACGTTCAACTGCTCACCCAGACGGGTGCATTCTCCCTCCCCA10.24752475247524752No Hit
AACTGGTAAACCATGTCAATAAACAAAAAAGACGCTCCCGACGAATGCATA10.24752475247524752No Hit
GACTGGGAAACCCTGTCTCTTATGCACATCTGACGCTGCCGACGAAGGCTT10.24752475247524752No Hit
GACTGGGAAACCCTGTCTCTTATACCACATCTGACGCTGCCGACGAAGGCT10.24752475247524752No Hit
GGCTTAATGCCATACCCTTGGTGATGAGTTCTTGCTCTGGTAGTTCGCATG10.24752475247524752No Hit
TACTGGTAAACCATGTCACTAATACACATCTGACGCTTAAGAATAATGAAT10.24752475247524752No Hit
GGACTGGGAAACCCTGACTCTTATACACATCTGACGCTGCCGACGAAGGCT10.24752475247524752No Hit
TGTGAGTCCTCGTATTTTCATCAAAAAATAATCTAATTTTAAAATCTCCAT10.24752475247524752No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCAGACGCTGCCGACGAAGGCT10.24752475247524752No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCGT10.24752475247524752No Hit
GGGGGGGGGGGGGGGGCGGGGGGAGGGGGGCCAACGAGATACCGCCGCCGC10.24752475247524752No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTTA10.24752475247524752No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTG10.24752475247524752No Hit
ACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCTC10.24752475247524752No Hit
GACTGGCCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTTAGGT10.24752475247524752No Hit
GACTGGGAAACCCTGTCTCTTATTACACATCTGACGCTGCCGACGAAGGCT10.24752475247524752No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGATGCTGCCGACGAAGGCTT10.24752475247524752No Hit
CTCCAACCCTCATATGAACACTATACCAAACAGAAGATTAAAACAAAATCA10.24752475247524752No Hit
GACAAACACTATCACTTACCGTCCCAGCAGTCTATTACTCTCCAAGCAGCT10.24752475247524752No Hit
GACTGGCAGTATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACG10.24752475247524752No Hit
GACTGGGAAACCCTGTCTCTTATACACTTCTGACGCTGCCGGCGCAGGCGG10.24752475247524752No Hit
GACTGGCACGCTCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCT10.24752475247524752No Hit
GACTGGGAAACCCTGTCTCTTAACACATCTGACGCTGCCGACGAAGGCTTA10.24752475247524752No Hit
GACTGGGAAACCCTGTCCCTTATACACATCTGACGCTGCCGACGAAGGCTT10.24752475247524752No Hit
GACTGGGAAACCCTGTCTTTATACACATCTGACGCTGCCGACGAAGGCTTA10.24752475247524752No Hit
TACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.24752475247524752No Hit
GACTGGCACGCTCCATGACCGACCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.24752475247524752No Hit
GGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.24752475247524752No Hit
GAATGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGATT10.24752475247524752No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)