FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215352

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215352
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences285
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTAC16658.245614035087726No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCTACGCTAT5820.350877192982455No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG82.807017543859649No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTAC51.7543859649122806No Hit
GGTTTCCCAGTCCTGTCTCTTATAACATCTCCGAGCCCACGAGACGCTACG31.0526315789473684No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCTACGCTATC31.0526315789473684No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTACG31.0526315789473684No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTTAC20.7017543859649122No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACGCTAC20.7017543859649122No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG20.7017543859649122No Hit
GGTTTCCCAGTCCACTATACTGCCAGTCCTGTCTCTTATACACATCTCCGA20.7017543859649122No Hit
GGTTTCCCAGTCCTGTCTCTTATACCATCTCCGAGCCCACGAGACGCTACG20.7017543859649122No Hit
GGTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTACG10.3508771929824561No Hit
GTTTGTAGGATAGAAAAGTTAGTGGCAACAGATTATGCTCTCATTGTAGAT10.3508771929824561No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC10.3508771929824561No Hit
GTTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTAC10.3508771929824561No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCACCGATCCAACGAGACGCTAA10.3508771929824561No Hit
ACGGTAAGGATGAAATGAGATCACACATGTGCAAGTATGGCTGTCTCTTAT10.3508771929824561No Hit
TGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATAC10.3508771929824561No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACGCTAC10.3508771929824561No Hit
GTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCTACGCTATC10.3508771929824561No Hit
CAGCTGAGGTAGCAAGAACCGCAGACTGGAGAGATGTGTCAGAACTTCTTA10.3508771929824561No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACGCTAC10.3508771929824561No Hit
GGTTTCCCCATGTTGACCAGGCTGATCTCGAACTCCTGACCTCAGGTGATC10.3508771929824561No Hit
GGTTTCCCAGTCCACTATACACATCTCCGATCCCACGAGACGCTACGCTAT10.3508771929824561No Hit
GATTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTAC10.3508771929824561No Hit
CCATTTTTAAGTGAGATATTTTTGACTAAAACCTTTCAATGTCCCTAAACA10.3508771929824561No Hit
GTTTCCCAGTCCACTTATACACATCTCCGAGCCCACGAGACGCTACGCTAT10.3508771929824561No Hit
GGGAGTTTGAAGGCTTTATTGGTGCGGAATCTGAGGGCACAGCCAAGCCCC10.3508771929824561No Hit
GGTTTCCCAGTCCACTATATGCCAGTCCTGTCTCTTATACACATCTCCGAG10.3508771929824561No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACGCTAC10.3508771929824561No Hit
GGTTTCCCAGTCCTGTCTCTTATACATATCTCCGAGCCCACGAGACGCTAC10.3508771929824561No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTAC10.3508771929824561No Hit
GGTTTCCCAGTCCTGTCTATTACACATCTCCGAGCCCACGAGACGCTACGC10.3508771929824561No Hit
GCATCTGAAAGATTATGTAGTTTGTGCAGGATCTCACCACACAGTCTGGTG10.3508771929824561No Hit
GGTTTCCCAGTCACTATACACATCTCCGAGCCCACGAGACGCTACGCTATC10.3508771929824561No Hit
GGTCTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCTACGCTAT10.3508771929824561No Hit
CAATTAAAACACCACTATAAATAAATCACCAACATGACACTATATCCAATC10.3508771929824561No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGTGACGCTAC10.3508771929824561No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCAAC10.3508771929824561No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC10.3508771929824561No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)