FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215353

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215353
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences285
Sequences flagged as poor quality0
Sequence length51
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT16457.54385964912281No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6522.807017543859647No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT103.508771929824561No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT51.7543859649122806No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTTA31.0526315789473684No Hit
GACTGGGAAACCCTGTCTCTTATAACATCTGACGCTGCCGACGAAGGCTTA31.0526315789473684No Hit
GACTGGCAGTATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACG20.7017543859649122No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT20.7017543859649122No Hit
GACTGGGAAACCCTGTCTCTTATACCACATCTGACGCTGCCGACGAAGGCT20.7017543859649122No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCTGGCGTAGTCGCGTG10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTTATACAATCTGACGCTGCCGACGAAGGCTTA10.3508771929824561No Hit
CACATGCACCCACCATGAACGTACCATCAGTCTCTGACTCGAAAAGCGGCA10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCGT10.3508771929824561No Hit
GACTGGGAAACCCTGTATCTTATACACATCTGACGCTGCCGACGAAGGCTT10.3508771929824561No Hit
GACTGGGAAATCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.3508771929824561No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATA10.3508771929824561No Hit
TCCCGTTCTTCGTCAACGTAACACATAATGGTACTTATCAGTGCCAAGCTG10.3508771929824561No Hit
CCATACTTGCACATGTGTGATCTCATTTCATCCTTACCGTCTGTCTCTTAT10.3508771929824561No Hit
GACTGGCACGCTCATGCCTGTAATCCTAGCACCTCAGAAGGCCGAGGCGGG10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTGATACACATCTGACGCTGCCGACGAAGGCAT10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTACCGACGAAGGCTT10.3508771929824561No Hit
GACATGGGGGAGCCTCCTAATGCTTAAATGCTTAGAGGGAGGGCAGTATGG10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGATT10.3508771929824561No Hit
GACTGGGAAAACCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACTAAGGCTT10.3508771929824561No Hit
GACTGGGAAACACTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.3508771929824561No Hit
GACTGGCATATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACGC10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTTTACACATCTGACGCTGCCGACGAAGGCTTA10.3508771929824561No Hit
CCACTGCTTTGTCAGGTATTCATCTGAGAACTTGACAATGGTTTTTGCCCG10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTTATACACTCTGACGCTGCCGACGAAGGCTTA10.3508771929824561No Hit
CTTGAGCTATCAGGGCATTACACCAATGATATCAGTGTTATAAGTGTCATA10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTTAACACATCTGACGCTGCCGACGAAGGCTTA10.3508771929824561No Hit
GAATGGGAAACCCTGTCTCTTATACACATCTGACTCTGCCGACGAAGGCTT10.3508771929824561No Hit
CATGGCTGCGGTATGCTCTTCTATAATAATATTATAGGAATGGCCAAATCT10.3508771929824561No Hit
GACTGGGAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTTA10.3508771929824561No Hit
GACTGGGAAACCCTGTCTTTTATACACATCTGACGCTGCCGACGAAGGCTT10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGGCCGACGAAGGCT10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTAATACACATCTGACGCTGCCGACGAAGGCTT10.3508771929824561No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)